Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS10980 and RALBFv3_RS10985 are separated by 3 nucleotidesRALBFv3_RS10985 and RALBFv3_RS10990 are separated by 10 nucleotidesRALBFv3_RS10990 and RALBFv3_RS10995 are separated by 70 nucleotidesRALBFv3_RS10995 and RALBFv3_RS11000 are separated by 63 nucleotides RALBFv3_RS10980: RALBFv3_RS10980 - hypothetical protein, at 2,426,029 to 2,426,676 _RS10980 RALBFv3_RS10985: RALBFv3_RS10985 - heme A synthase, at 2,426,680 to 2,427,771 _RS10985 RALBFv3_RS10990: RALBFv3_RS10990 - protoheme IX farnesyltransferase, at 2,427,782 to 2,428,714 _RS10990 RALBFv3_RS10995: RALBFv3_RS10995 - SCO family protein, at 2,428,785 to 2,429,390 _RS10995 RALBFv3_RS11000: RALBFv3_RS11000 - RNA polymerase sigma factor RpoH, at 2,429,454 to 2,430,374 _RS11000
Group Condition RALBFv3_RS10980 RALBFv3_RS10985 RALBFv3_RS10990 RALBFv3_RS10995 RALBFv3_RS11000
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -1.9 -6.3 -3.7 -2.2 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.8 -5.4 -3.6 -3.9 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.2 -5.3 -4.2 -3.3 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -1.0 -5.5 -3.9 -1.7 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.2 -4.8 -3.6 -2.8 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.5 -3.1 -3.9 -0.9 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.0 -1.6 -3.3 -1.4 N.D.
cpg CPG -0.8 -0.9 -3.5 -0.3 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -2.2 -2.3 -0.7 N.D.
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.6 -2.3 -1.6 -1.0 N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.4 -1.0 -2.1 -1.0 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -1.4 -3.0 -0.6 N.D.
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.1 -1.8 -1.0 -1.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.0 -1.0 -1.3 -0.6 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.3 -1.4 -1.5 -0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.6 -0.9 -2.2 -0.6 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.5 -1.8 -1.5 -0.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.5 -0.7 -1.3 -0.8 N.D.
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.4 -2.7 -1.3 -0.7 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.5 -1.2 -2.1 -0.3 N.D.
in planta tomato xylem local (total stem) -2.8 +0.4 -1.2 -0.3 N.D.
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.5 -2.2 -1.5 -0.5 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 -1.0 -2.4 -0.6 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.3 -1.2 -1.1 -0.1 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.2 -1.1 -2.2 -0.2 N.D.
smsa no antibiotic control SMSA no antibiotic control -0.6 -1.7 -1.0 +0.3 N.D.
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 -1.7 -1.1 -0.6 N.D.
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +1.2 -1.2 -0.7 -0.9 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.1 -1.3 -0.5 -0.9 N.D.
cpg CPG +1.8 -0.6 -1.8 -0.0 N.D.
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RALBFv3_RS10980
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RALBFv3_RS10985
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RALBFv3_RS10995
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RALBFv3_RS11000
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