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Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS10885 and RALBFv3_RS10890 are separated by 66 nucleotides
RALBFv3_RS10890 and RALBFv3_RS10895 are separated by 70 nucleotides
RALBFv3_RS10895 and RALBFv3_RS10900 are separated by 135 nucleotides
RALBFv3_RS10900 and RALBFv3_RS10905 are separated by 176 nucleotides
RALBFv3_RS10885: RALBFv3_RS10885 - bacterioferritin, at 2,410,348 to 2,410,827
_RS10885
RALBFv3_RS10890: RALBFv3_RS10890 - molybdopterin-synthase adenylyltransferase MoeB, at 2,410,894 to 2,411,643
_RS10890
RALBFv3_RS10895: RALBFv3_RS10895 - S41 family peptidase, at 2,411,714 to 2,413,330
_RS10895
RALBFv3_RS10900: RALBFv3_RS10900 - 2,3-diphosphoglycerate-dependent phosphoglycerate mutase, at 2,413,466 to 2,414,212
_RS10900
RALBFv3_RS10905: RALBFv3_RS10905 - rhodanese-like domain-containing protein, at 2,414,389 to 2,414,811
_RS10905
Group
Condition
RALBFv3
_RS10885
RALBFv3
_RS10890
RALBFv3
_RS10895
RALBFv3
_RS10900
RALBFv3
_RS10905
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-1.0
N.D.
-4.2
N.D.
-0.7
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.1
N.D.
-4.1
N.D.
-1.6
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.3
N.D.
-4.0
N.D.
-0.8
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
-0.4
N.D.
-4.1
N.D.
-0.2
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.6
N.D.
-4.1
N.D.
+0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
-0.5
N.D.
-4.4
N.D.
+0.6
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.3
N.D.
-1.6
N.D.
-2.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+0.1
N.D.
-3.4
N.D.
-0.4
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
+0.6
N.D.
-3.5
N.D.
-0.5
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.2
N.D.
-3.1
N.D.
-0.1
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.4
N.D.
-3.2
N.D.
-0.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
-0.5
N.D.
-2.6
N.D.
-0.2
in planta
tomato xylem local (total stem)
-1.7
N.D.
-1.0
N.D.
-0.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
+0.6
N.D.
-4.0
N.D.
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
+0.0
N.D.
-3.1
N.D.
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-0.1
N.D.
-2.6
N.D.
-0.5
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.9
N.D.
-1.3
N.D.
-0.6
in planta
Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
-0.0
N.D.
-2.0
N.D.
-0.9
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
+0.1
N.D.
-2.9
N.D.
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
+0.3
N.D.
-3.1
N.D.
+0.1
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.5
N.D.
-1.5
N.D.
-0.6
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
-0.3
N.D.
-1.8
N.D.
-0.5
in planta
tomato xylem local (total stem)
-1.6
N.D.
-1.7
N.D.
+0.7
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.7
N.D.
-0.3
N.D.
-1.5
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
-0.1
N.D.
-2.4
N.D.
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-0.2
N.D.
-2.2
N.D.
+0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
+0.4
N.D.
-2.5
N.D.
+0.1
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.2
N.D.
-1.0
N.D.
-1.2
stress
SMSA with Ralstonia_antibiotic_mix
+0.3
N.D.
-1.6
N.D.
-0.6
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
-0.8
N.D.
-0.6
N.D.
+1.2
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