Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS10855 and RALBFv3_RS10860 are separated by 27 nucleotidesRALBFv3_RS10860 and RALBFv3_RS10865 are separated by 108 nucleotidesRALBFv3_RS10865 and RALBFv3_RS10870 overlap by 32 nucleotidesRALBFv3_RS10870 and RALBFv3_RS10875 are separated by 40 nucleotides RALBFv3_RS10855: RALBFv3_RS10855 - glutamate--cysteine ligase, at 2,404,821 to 2,406,116 _RS10855 RALBFv3_RS10860: RALBFv3_RS10860 - glutathione synthase, at 2,406,144 to 2,407,118 _RS10860 RALBFv3_RS10865: RALBFv3_RS10865 - PTS fructose transporter subunit IIA, at 2,407,227 to 2,407,682 _RS10865 RALBFv3_RS10870: RALBFv3_RS10870 - HPr family phosphocarrier protein, at 2,407,651 to 2,407,920 _RS10870 RALBFv3_RS10875: RALBFv3_RS10875 - phosphoenolpyruvate--protein phosphotransferase, at 2,407,961 to 2,409,721 _RS10875
Group Condition RALBFv3_RS10855 RALBFv3_RS10860 RALBFv3_RS10865 RALBFv3_RS10870 RALBFv3_RS10875
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -4.3 -0.8 N.D. -3.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -3.0 -1.2 N.D. -2.8
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -2.4 +0.0 N.D. -3.5
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi N.D. -0.5 -5.1 N.D. +0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. -0.5 +0.6 N.D. -3.8
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. -1.9 -3.0 N.D. +1.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days N.D. -0.6 -3.3 N.D. +0.5
smsa no antibiotic control SMSA no antibiotic control N.D. -0.1 -3.9 N.D. +0.9
m63_quarter_strength M63_quarter_strength N.D. -0.3 -4.3 N.D. +1.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.3 -4.0 N.D. +2.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.2 -3.9 N.D. +2.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.4 -3.7 N.D. +2.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. -0.5 -2.5 N.D. +1.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.1 -4.4 N.D. +3.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -2.2 +1.8 N.D. -0.7
in planta tomato xylem local (total stem) N.D. -0.4 -2.6 N.D. +1.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.0 -4.6 N.D. +3.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. +0.2 -4.6 N.D. +3.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.4 -4.4 N.D. +3.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. +0.3 -4.4 N.D. +3.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. +0.5 -4.2 N.D. +3.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.6 -1.8 N.D. +3.0
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.2 -2.7 N.D. +3.2
in planta tomato xylem local (total stem) N.D. +0.9 -2.6 N.D. +3.0
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.2 -1.2 N.D. +3.0
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. +2.5 -1.7 N.D. +0.9
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -1.1 -1.0 N.D. +4.1
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. +0.2 -1.6 N.D. +3.6
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.6 -1.2 N.D. +3.5
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.6 +0.7 N.D. +3.3
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