Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 100 experiments or choose conditions or try the comparative fitness browser

500 ntRALBFv3_RS10555 and RALBFv3_RS10560 are separated by 113 nucleotidesRALBFv3_RS10560 and RALBFv3_RS10565 are separated by 101 nucleotidesRALBFv3_RS10565 and RALBFv3_RS10570 are separated by 58 nucleotidesRALBFv3_RS10570 and RALBFv3_RS10575 are separated by 180 nucleotides RALBFv3_RS10555: RALBFv3_RS10555 - short-chain dehydrogenase, at 2,345,657 to 2,346,457 _RS10555 RALBFv3_RS10560: RALBFv3_RS10560 - thiol:disulfide interchange protein DsbA/DsbL, at 2,346,571 to 2,347,227 _RS10560 RALBFv3_RS10565: RALBFv3_RS10565 - SPOR domain-containing protein, at 2,347,329 to 2,348,051 _RS10565 RALBFv3_RS10570: RALBFv3_RS10570 - arginine--tRNA ligase, at 2,348,110 to 2,349,912 _RS10570 RALBFv3_RS10575: RALBFv3_RS10575 - DUF1840 domain-containing protein, at 2,350,093 to 2,350,413 _RS10575
Group Condition RALBFv3_RS10555 RALBFv3_RS10560 RALBFv3_RS10565 RALBFv3_RS10570 RALBFv3_RS10575
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.5 -4.2 -0.2 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.9 -4.2 +0.0 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.0 -2.9 -2.2 N.D. N.D.
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi +0.1 -2.4 -1.6 N.D. N.D.
cpg CPG -0.3 -0.7 -2.5 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 -3.4 -0.3 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.4 -0.8 -2.9 N.D. N.D.
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi +0.0 -2.4 -0.9 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.2 -1.7 -1.8 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.3 +0.0 -3.5 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 -3.9 +0.2 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.6 -1.4 -1.0 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.2 -2.2 -0.8 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.2 -2.6 -1.0 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.8 -2.3 -0.3 N.D. N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 -2.5 +0.1 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.3 -3.8 +0.8 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +1.1 -3.0 +0.7 N.D. N.D.
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 +1.7 -0.7 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.5 -2.3 +1.4 N.D. N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.6 +1.8 -1.0 N.D. N.D.
in planta tomato xylem local (total stem) -1.0 +1.1 +1.5 N.D. N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 +2.6 -1.2 N.D. N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.8 +2.5 +0.2 N.D. N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 +1.9 +0.9 N.D. N.D.
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +2.3 +0.5 N.D. N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.7 +2.3 -0.1 N.D. N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +3.0 +1.7 -1.2 N.D. N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.9 +2.5 +0.5 N.D. N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +2.8 +1.8 -0.2 N.D. N.D.
remove
RALBFv3_RS10555
plot		 remove
RALBFv3_RS10560
plot		 remove
RALBFv3_RS10565		 remove
RALBFv3_RS10570
plot		 remove
RALBFv3_RS10575
plot