Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 100 experiments or choose conditions or try the comparative fitness browser

500 ntRALBFv3_RS10420 and RALBFv3_RS10425 overlap by 4 nucleotidesRALBFv3_RS10425 and RALBFv3_RS10430 are separated by 16 nucleotidesRALBFv3_RS10430 and RALBFv3_RS10435 are separated by 19 nucleotidesRALBFv3_RS10435 and RALBFv3_RS10440 are separated by 1 nucleotides RALBFv3_RS10420: RALBFv3_RS10420 - MBL fold metallo-hydrolase, at 2,320,613 to 2,321,575 _RS10420 RALBFv3_RS10425: RALBFv3_RS10425 - DUF1289 domain-containing protein, at 2,321,572 to 2,321,838 _RS10425 RALBFv3_RS10430: RALBFv3_RS10430 - YbaK/EbsC family protein, at 2,321,855 to 2,322,358 _RS10430 RALBFv3_RS10435: RALBFv3_RS10435 - hydroxymethylglutaryl-CoA lyase, at 2,322,378 to 2,323,307 _RS10435 RALBFv3_RS10440: RALBFv3_RS10440 - glyoxylate/hydroxypyruvate reductase A, at 2,323,309 to 2,324,250 _RS10440
Group Condition RALBFv3_RS10420 RALBFv3_RS10425 RALBFv3_RS10430 RALBFv3_RS10435 RALBFv3_RS10440
in planta tomato xylem local (total stem) -1.0 N.D. -4.1 -0.7 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.1 N.D. -3.6 -0.7 +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.0 N.D. -3.4 -0.7 +0.6
in planta tomato xylem local (total stem) +0.7 N.D. -4.1 -0.9 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.7 N.D. -2.8 -0.2 +0.2
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.2 N.D. -1.9 -1.1 -0.6
cpg no stress control CPG no stress control -0.4 N.D. -1.2 -1.2 -0.2
smsa no antibiotic control SMSA no antibiotic control -0.6 N.D. -1.4 -0.8 -0.1
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 N.D. -1.3 -1.6 +0.3
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 N.D. -1.6 -1.3 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 N.D. -1.9 -0.7 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.9 N.D. -1.4 -0.6 +0.3
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 N.D. -1.3 -1.3 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.5 N.D. -1.0 -0.7 -0.2
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.2 N.D. -0.5 -1.3 -0.2
smsa no antibiotic control SMSA no antibiotic control -0.1 N.D. -1.4 -0.6 +0.1
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 N.D. -0.4 -1.5 -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.3 N.D. -1.3 -0.4 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 N.D. -1.7 -0.2 +0.1
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.2 N.D. -1.3 -0.5 +0.2
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 N.D. -0.0 -1.7 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.7 N.D. -0.4 -0.6 +0.4
in planta tomato xylem local (total stem) +0.5 N.D. -0.4 -1.4 +0.7
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.3 N.D. +0.8 -0.7 +0.3
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 N.D. +1.0 -1.3 +0.2
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.4 N.D. +1.2 -0.6 +0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.3 N.D. +0.9 +0.6 -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.4 N.D. +2.0 -0.8 +0.1
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +1.5 N.D. +1.5 -0.7 +0.1
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.1 N.D. +2.7 -1.4 +0.1
remove
RALBFv3_RS10420
plot		 remove
RALBFv3_RS10425
plot		 remove
RALBFv3_RS10430		 remove
RALBFv3_RS10435
plot		 remove
RALBFv3_RS10440
plot