Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 100 experiments or choose conditions or try the comparative fitness browser

500 ntRALBFv3_RS09855 and RALBFv3_RS09860 are separated by 167 nucleotidesRALBFv3_RS09860 and RALBFv3_RS09865 are separated by 38 nucleotidesRALBFv3_RS09865 and RALBFv3_RS09870 are separated by 45 nucleotidesRALBFv3_RS09870 and RALBFv3_RS09875 are separated by 8 nucleotides RALBFv3_RS09855: RALBFv3_RS09855 - complex I NDUFA9 subunit family protein, at 2,195,930 to 2,196,934 _RS09855 RALBFv3_RS09860: RALBFv3_RS09860 - lytic transglycosylase, at 2,197,102 to 2,199,054 _RS09860 RALBFv3_RS09865: RALBFv3_RS09865 - 5-formyltetrahydrofolate cyclo-ligase, at 2,199,093 to 2,199,698 _RS09865 RALBFv3_RS09870: RALBFv3_RS09870 - competence protein TfoX, at 2,199,744 to 2,200,205 _RS09870 RALBFv3_RS09875: RALBFv3_RS09875 - methylenetetrahydrofolate reductase [NAD(P)H], at 2,200,214 to 2,201,044 _RS09875
Group Condition RALBFv3_RS09855 RALBFv3_RS09860 RALBFv3_RS09865 RALBFv3_RS09870 RALBFv3_RS09875
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.5 -1.9 -2.6 -0.9 -3.8
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.7 -1.4 -3.5 +0.1 -3.7
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.8 -1.8 -2.8 -0.7 -3.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.7 -1.5 -1.5 -0.5 -3.9
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.1 -0.7 -2.0 -0.3 -3.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.7 -2.0 -1.2 -0.3 -2.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.6 +0.1 -0.9 +0.5 -5.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 +0.2 -1.4 +0.6 -4.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.4 -0.1 -1.1 +0.1 -3.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 +0.1 -0.7 +0.6 -4.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.8 +0.0 -0.6 +0.4 -4.5
in planta tomato xylem local (total stem) +0.9 +0.1 -1.0 +1.1 -4.6
m63_quarter_strength M63_quarter_strength +0.5 +0.0 -0.6 +0.2 -3.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.6 +0.3 -0.5 +0.8 -4.5
in planta tomato xylem local (total stem) -0.1 +0.5 -0.7 +1.1 -4.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.4 -0.4 -0.5 +0.2 -2.8
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.2 +0.2 -0.8 +0.4 -3.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 +0.0 -0.8 +1.2 -3.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.7 +0.4 -0.4 +1.2 -4.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 +0.1 -0.9 +0.8 -3.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.8 +0.3 -1.2 +1.5 -3.9
m63_quarter_strength M63_quarter_strength +0.5 +0.1 -0.0 +0.9 -3.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.5 +0.1 -1.0 +0.8 -2.6
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.7 +0.3 -0.5 +0.2 -2.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.6 +0.2 -0.5 +0.7 -2.6
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.4 +0.1 -0.7 +1.2 -2.5
in planta tomato xylem local (total stem) +0.3 +0.1 -1.1 +1.7 -2.4
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.0 +0.2 -0.6 +1.1 -2.9
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.3 +0.0 -0.4 +0.9 -3.0
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.8 +0.3 -0.6 +1.5 -2.6
remove
RALBFv3_RS09855
plot		 remove
RALBFv3_RS09860
plot		 remove
RALBFv3_RS09865		 remove
RALBFv3_RS09870
plot		 remove
RALBFv3_RS09875
plot