Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS09835 and RALBFv3_RS09840 are separated by 83 nucleotidesRALBFv3_RS09840 and RALBFv3_RS09845 are separated by 3 nucleotidesRALBFv3_RS09845 and RALBFv3_RS09850 overlap by 4 nucleotidesRALBFv3_RS09850 and RALBFv3_RS09855 are separated by 196 nucleotides RALBFv3_RS09835: RALBFv3_RS09835 - 3-keto-5-aminohexanoate cleavage protein, at 2,191,932 to 2,192,765 _RS09835 RALBFv3_RS09840: RALBFv3_RS09840 - amino acid ABC transporter substrate-binding protein, at 2,192,849 to 2,193,754 _RS09840 RALBFv3_RS09845: RALBFv3_RS09845 - multifunctional CCA addition/repair protein, at 2,193,758 to 2,195,047 _RS09845 RALBFv3_RS09850: RALBFv3_RS09850 - glutathione S-transferase, at 2,195,044 to 2,195,733 _RS09850 RALBFv3_RS09855: RALBFv3_RS09855 - complex I NDUFA9 subunit family protein, at 2,195,930 to 2,196,934 _RS09855
Group Condition RALBFv3_RS09835 RALBFv3_RS09840 RALBFv3_RS09845 RALBFv3_RS09850 RALBFv3_RS09855
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.1 -0.1 -4.3 -0.1 -0.1
in planta tomato xylem local (total stem) +0.0 -1.0 -2.3 -0.6 -0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.3 +0.1 -4.0 +0.0 -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.0 -0.0 -4.4 +0.3 +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.0 -0.4 -3.5 +0.0 +0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.2 +0.1 -3.9 +0.1 +0.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days +0.0 +0.4 -3.4 +0.1 -0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.0 +0.1 -4.1 +0.4 +0.7
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.1 +0.5 -4.2 +0.3 +0.7
m63_quarter_strength M63_quarter_strength +0.4 -0.8 -2.4 +0.0 +0.5
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.2 -0.5 -2.8 +0.2 +0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 -0.2 -2.3 -0.2 +0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.1 -0.5 -1.9 -0.2 +0.3
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.1 +0.4 -2.8 -0.1 +0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.1 -0.1 -2.8 +0.0 +0.8
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.1 +0.7 -2.9 -0.1 +0.4
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.3 -0.7 -1.9 +0.1 +0.5
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.2 +0.5 -1.6 -0.1 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 +0.1 -2.0 +0.2 +0.6
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.3 -1.4 +0.4 +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 +0.2 -2.2 +0.3 +0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.0 -1.8 +0.2 +0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.2 -1.9 +0.2 +0.8
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.2 +0.6 -1.6 -0.1 +0.4
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.4 +0.5 -1.6 +0.0 +0.3
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 -0.3 -1.2 -0.0 +1.0
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 -0.4 -0.8 -0.5 +1.3
in planta tomato xylem local (total stem) +0.6 +0.8 -1.6 +0.3 +0.3
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.1 +0.8 -1.6 +0.1 +1.2
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.3 +1.9 -0.6 -0.1 +0.6
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