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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS09835 and RALBFv3_RS09840 are separated by 83 nucleotides
RALBFv3_RS09840 and RALBFv3_RS09845 are separated by 3 nucleotides
RALBFv3_RS09845 and RALBFv3_RS09850 overlap by 4 nucleotides
RALBFv3_RS09850 and RALBFv3_RS09855 are separated by 196 nucleotides
RALBFv3_RS09835: RALBFv3_RS09835 - 3-keto-5-aminohexanoate cleavage protein, at 2,191,932 to 2,192,765
_RS09835
RALBFv3_RS09840: RALBFv3_RS09840 - amino acid ABC transporter substrate-binding protein, at 2,192,849 to 2,193,754
_RS09840
RALBFv3_RS09845: RALBFv3_RS09845 - multifunctional CCA addition/repair protein, at 2,193,758 to 2,195,047
_RS09845
RALBFv3_RS09850: RALBFv3_RS09850 - glutathione S-transferase, at 2,195,044 to 2,195,733
_RS09850
RALBFv3_RS09855: RALBFv3_RS09855 - complex I NDUFA9 subunit family protein, at 2,195,930 to 2,196,934
_RS09855
Group
Condition
RALBFv3
_RS09835
RALBFv3
_RS09840
RALBFv3
_RS09845
RALBFv3
_RS09850
RALBFv3
_RS09855
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.1
-0.1
-4.3
-0.1
-0.1
in planta
tomato xylem local (total stem)
+0.0
-1.0
-2.3
-0.6
-0.1
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
+0.3
+0.1
-4.0
+0.0
-0.2
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.0
-0.0
-4.4
+0.3
+0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.0
-0.4
-3.5
+0.0
+0.3
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
-0.2
+0.1
-3.9
+0.1
+0.4
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days
+0.0
+0.4
-3.4
+0.1
-0.3
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.0
+0.1
-4.1
+0.4
+0.7
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.1
+0.5
-4.2
+0.3
+0.7
m63_quarter_strength
M63_quarter_strength
+0.4
-0.8
-2.4
+0.0
+0.5
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.2
-0.5
-2.8
+0.2
+0.7
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.2
-0.2
-2.3
-0.2
+0.3
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.1
-0.5
-1.9
-0.2
+0.3
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.1
+0.4
-2.8
-0.1
+0.2
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.1
-0.1
-2.8
+0.0
+0.8
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.1
+0.7
-2.9
-0.1
+0.4
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
+0.3
-0.7
-1.9
+0.1
+0.5
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.2
+0.5
-1.6
-0.1
-0.4
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.0
+0.1
-2.0
+0.2
+0.6
in planta
Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.3
-0.3
-1.4
+0.4
+0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.3
+0.2
-2.2
+0.3
+0.6
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.2
+0.0
-1.8
+0.2
+0.8
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.1
+0.2
-1.9
+0.2
+0.8
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.2
+0.6
-1.6
-0.1
+0.4
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.4
+0.5
-1.6
+0.0
+0.3
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.3
-0.3
-1.2
-0.0
+1.0
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.5
-0.4
-0.8
-0.5
+1.3
in planta
tomato xylem local (total stem)
+0.6
+0.8
-1.6
+0.3
+0.3
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.1
+0.8
-1.6
+0.1
+1.2
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.3
+1.9
-0.6
-0.1
+0.6
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RALBFv3_RS09845
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