Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS09665 and RALBFv3_RS09670 are separated by 169 nucleotidesRALBFv3_RS09670 and RALBFv3_RS09675 are separated by 39 nucleotidesRALBFv3_RS09675 and RALBFv3_RS09680 are separated by 13 nucleotidesRALBFv3_RS09680 and RALBFv3_RS09685 are separated by 8 nucleotides RALBFv3_RS09665: RALBFv3_RS09665 - FAD-binding oxidoreductase, at 2,150,148 to 2,151,674 _RS09665 RALBFv3_RS09670: RALBFv3_RS09670 - class I SAM-dependent rRNA methyltransferase, at 2,151,844 to 2,153,037 _RS09670 RALBFv3_RS09675: RALBFv3_RS09675 - tyrosine recombinase XerC, at 2,153,077 to 2,154,066 _RS09675 RALBFv3_RS09680: RALBFv3_RS09680 - DUF484 domain-containing protein, at 2,154,080 to 2,154,778 _RS09680 RALBFv3_RS09685: RALBFv3_RS09685 - Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB, at 2,154,787 to 2,156,253 _RS09685
Group Condition RALBFv3_RS09665 RALBFv3_RS09670 RALBFv3_RS09675 RALBFv3_RS09680 RALBFv3_RS09685
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.2 -2.2 -0.3 -2.6 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.1 -2.0 -0.5 -1.8 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 +0.2 -0.7 -3.1 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.2 -2.3 -0.7 -0.6 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.2 -2.2 -1.0 +0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 +0.1 +0.3 -3.6 N.D.
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 -0.1 -0.6 -2.6 N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.1 -0.2 -0.1 -2.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.0 -0.0 -0.6 -1.6 N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 +0.1 -0.7 -2.0 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.1 -1.2 -0.3 -0.3 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.4 -0.0 -0.6 -0.8 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.0 +0.1 -0.6 -1.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.1 +0.1 -0.7 -1.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.0 -0.1 -0.4 -1.2 N.D.
cpg no stress control CPG no stress control +0.1 -0.0 +0.5 -2.3 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 +0.0 -0.6 -1.1 N.D.
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.1 -0.4 -0.7 -0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.2 -0.0 -0.7 -0.8 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.0 +0.2 -1.1 -0.5 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.2 -0.8 -0.7 +0.6 N.D.
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 +0.0 -0.3 -1.3 N.D.
in planta tomato xylem local (total stem) +0.3 +0.3 -0.8 -0.3 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.0 -0.2 -0.9 +1.1 N.D.
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.2 -0.8 +1.1 N.D.
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.0 +0.1 -0.4 +1.3 N.D.
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.4 -0.0 +0.3 +1.0 N.D.
m63_quarter_strength M63_quarter_strength +0.1 +0.1 -0.4 +1.9 N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.2 -0.6 +3.7 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.3 +0.4 +0.4 +3.3 N.D.
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RALBFv3_RS09665
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RALBFv3_RS09670
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