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Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS09610 and RALBFv3_RS09615 are separated by 55 nucleotides
RALBFv3_RS09615 and RALBFv3_RS09620 are separated by 209 nucleotides
RALBFv3_RS09620 and RALBFv3_RS09625 are separated by 143 nucleotides
RALBFv3_RS09625 and RALBFv3_RS09630 are separated by 34 nucleotides
RALBFv3_RS09610: RALBFv3_RS09610 - sensor histidine kinase, at 2,137,602 to 2,138,948
_RS09610
RALBFv3_RS09615: RALBFv3_RS09615 - DNA-binding response regulator, at 2,139,004 to 2,139,582
_RS09615
RALBFv3_RS09620: RALBFv3_RS09620 - hypothetical protein, at 2,139,792 to 2,141,084
_RS09620
RALBFv3_RS09625: RALBFv3_RS09625 - ATP-dependent protease ATPase subunit HslU, at 2,141,228 to 2,142,562
_RS09625
RALBFv3_RS09630: RALBFv3_RS09630 - ATP-dependent protease subunit HslV, at 2,142,597 to 2,143,133
_RS09630
Group
Condition
RALBFv3
_RS09610
RALBFv3
_RS09615
RALBFv3
_RS09620
RALBFv3
_RS09625
RALBFv3
_RS09630
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-1.8
-5.6
+0.0
+0.2
-0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-1.8
-4.0
+0.0
+0.4
-0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-1.5
-4.0
-0.3
+0.5
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
-2.5
-2.5
-0.2
+0.1
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-1.8
-3.0
+0.0
-0.2
-0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-1.9
-2.8
-0.1
-0.0
-0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
-2.3
-2.7
-0.0
+0.0
-0.0
stress
SMSA with Ralstonia_antibiotic_mix
-2.0
-2.7
-0.1
-0.1
-0.0
stress
SMSA with Ralstonia_antibiotic_mix
-2.2
-2.6
+0.0
-0.0
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
-1.7
-2.9
-0.0
-0.1
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
-1.9
-3.0
-0.0
-0.0
+0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
-2.0
-2.6
+0.1
-0.1
-0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-1.5
-3.1
-0.1
-0.0
+0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
-1.7
-2.9
+0.0
-0.1
-0.0
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-1.8
-2.3
-0.2
+0.3
-0.5
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
-2.4
-1.8
-0.1
-0.1
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-2.0
-2.7
+0.1
+0.2
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
-1.9
-2.4
-0.1
-0.0
+0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
-1.8
-2.3
-0.1
-0.0
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-2.0
-2.2
-0.2
-0.1
+0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
-2.0
-2.0
+0.1
-0.3
+0.0
in planta
tomato xylem local (total stem)
-1.0
-2.7
+0.1
-0.2
-0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-1.8
-2.1
-0.1
-0.2
+0.2
stress
SMSA with Ralstonia_antibiotic_mix
-2.0
-1.7
-0.0
+0.0
-0.0
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-2.0
-1.2
-0.1
-0.2
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
-1.1
-2.5
-0.1
+0.1
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
-1.8
-1.8
-0.0
-0.1
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
-1.3
-2.3
-0.1
+0.1
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-1.6
-1.5
-0.4
+0.1
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-2.1
-1.3
-0.1
-0.1
+0.3
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RALBFv3_RS09620
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