Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS09240 and RALBFv3_RS09245 are separated by 6 nucleotidesRALBFv3_RS09245 and RALBFv3_RS09250 overlap by 4 nucleotidesRALBFv3_RS09250 and RALBFv3_RS09255 overlap by 4 nucleotidesRALBFv3_RS09255 and RALBFv3_RS09260 are separated by 13 nucleotides RALBFv3_RS09240: RALBFv3_RS09240 - alpha/beta hydrolase, at 2,047,141 to 2,047,941 _RS09240 RALBFv3_RS09245: RALBFv3_RS09245 - FAD-binding oxidoreductase, at 2,047,948 to 2,049,255 _RS09245 RALBFv3_RS09250: RALBFv3_RS09250 - amino acid ABC transporter ATP-binding protein, at 2,049,252 to 2,050,013 _RS09250 RALBFv3_RS09255: RALBFv3_RS09255 - ectoine/hydroxyectoine ABC transporter permease subunit EhuD, at 2,050,010 to 2,050,681 _RS09255 RALBFv3_RS09260: RALBFv3_RS09260 - amino acid ABC transporter substrate-binding protein, at 2,050,695 to 2,051,471 _RS09260
Group Condition RALBFv3_RS09240 RALBFv3_RS09245 RALBFv3_RS09250 RALBFv3_RS09255 RALBFv3_RS09260
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.5 -0.6 -3.7 -0.3 -0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.4 -0.1 -1.3 -0.1 -0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.4 +0.0 -1.5 -0.0 +0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.2 -0.3 -1.1 -0.1 -0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.1 +0.1 -1.5 -0.1 +0.1
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.2 -0.5 -1.2 +0.2 -0.1
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.1 -0.3 -1.1 -0.1 +0.2
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.6 -0.4 -0.7 +0.4 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.1 +1.1 +0.1 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.3 +1.2 +0.1 -0.3
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 -0.4 +0.7 +0.2 -0.1
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.7 +0.4 -0.6 +0.2 +0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 -0.3 +0.7 +0.2 -0.1
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.5 -0.1 +0.8 -0.1 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.3 -0.1 +1.0 +0.1 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 +0.0 +1.3 -0.1 -0.0
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.6 -0.0 +1.0 +0.0 -0.0
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 +0.2 +1.3 +0.1 +0.1
in planta tomato xylem local (total stem) +0.6 -0.3 +1.0 +0.3 +0.2
m63_quarter_strength M63_quarter_strength +0.1 -0.2 +1.6 +0.1 +0.1
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 -0.4 +1.7 +0.1 +0.3
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.5 -0.1 +1.3 -0.1 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 -0.2 +1.4 +0.2 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 -0.0 +1.4 +0.0 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 +0.2 +1.0 +0.1 +0.3
in planta tomato xylem local (total stem) +0.5 -0.5 +1.2 +0.5 +0.2
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.9 +0.3 +0.7 +0.3 +0.0
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.4 +2.8 -0.0 -0.1
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.6 -0.1 +2.5 +0.3 -0.0
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.5 -0.2 +2.8 +0.2 -0.0
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