Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS08860 and RALBFv3_RS08865 overlap by 1 nucleotidesRALBFv3_RS08865 and RALBFv3_RS08870 are separated by 242 nucleotidesRALBFv3_RS08870 and RALBFv3_RS08875 are separated by 321 nucleotidesRALBFv3_RS08875 and RALBFv3_RS08880 are separated by 107 nucleotides RALBFv3_RS08860: RALBFv3_RS08860 - 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG, at 1,958,183 to 1,958,860 _RS08860 RALBFv3_RS08865: RALBFv3_RS08865 - tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG, at 1,958,860 to 1,960,803 _RS08865 RALBFv3_RS08870: RALBFv3_RS08870 - branched-chain amino acid ABC transporter substrate-binding protein, at 1,961,046 to 1,962,194 _RS08870 RALBFv3_RS08875: RALBFv3_RS08875 - short chain dehydrogenase, at 1,962,516 to 1,963,121 _RS08875 RALBFv3_RS08880: RALBFv3_RS08880 - LysR family transcriptional regulator, at 1,963,229 to 1,964,122 _RS08880
Group Condition RALBFv3_RS08860 RALBFv3_RS08865 RALBFv3_RS08870 RALBFv3_RS08875 RALBFv3_RS08880
in planta tomato xylem local (total stem) N.D. N.D. -0.2 -1.1 -1.1
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.2 -1.7 -0.5
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. N.D. -0.6 -0.7 -0.5
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. N.D. -0.2 -1.0 -0.2
in planta tomato xylem local (total stem) N.D. N.D. +0.1 -1.1 -0.3
cpg no stress control CPG no stress control N.D. N.D. +0.0 -0.8 -0.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. N.D. +0.0 -1.2 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.3 -0.8 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.2 +0.3 -1.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.3 +0.6 -1.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. N.D. -0.1 -0.7 -0.2
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi N.D. N.D. -0.1 -0.7 +0.1
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. N.D. +0.1 -1.0 +0.2
cpg CPG N.D. N.D. -0.4 -0.7 +0.5
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.2 -0.6 +0.3
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.0 -0.9 +0.5
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. N.D. -0.6 +0.1 +0.3
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. N.D. -0.6 +0.5 -0.1
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. N.D. -0.1 +0.7 -0.8
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. N.D. +0.1 -0.4 +0.4
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. N.D. -0.5 +0.6 +0.0
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. N.D. -0.6 -0.0 +0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.3 +0.7 -0.0
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.1 +0.8 -0.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. N.D. -0.3 +0.7 +0.1
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi N.D. N.D. +0.1 +0.9 -0.4
in planta tomato xylem local (total stem) N.D. N.D. -0.6 +1.2 +0.3
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. N.D. -0.3 +0.6 +0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.1 +0.7 +0.4
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.4 +1.5 +0.2
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