Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 100 experiments or choose conditions or try the comparative fitness browser

500 ntRALBFv3_RS08470 and RALBFv3_RS08475 are separated by 129 nucleotidesRALBFv3_RS08475 and RALBFv3_RS08480 overlap by 4 nucleotidesRALBFv3_RS08480 and RALBFv3_RS08485 are separated by 123 nucleotidesRALBFv3_RS08485 and RALBFv3_RS08490 are separated by 58 nucleotides RALBFv3_RS08470: RALBFv3_RS08470 - O-acetylserine/cysteine exporter, at 1,868,198 to 1,869,094 _RS08470 RALBFv3_RS08475: RALBFv3_RS08475 - flavocytochrome C sulfide dehydrogenase, at 1,869,224 to 1,870,516 _RS08475 RALBFv3_RS08480: RALBFv3_RS08480 - hypothetical protein, at 1,870,513 to 1,870,863 _RS08480 RALBFv3_RS08485: RALBFv3_RS08485 - BON domain-containing protein, at 1,870,987 to 1,871,805 _RS08485 RALBFv3_RS08490: RALBFv3_RS08490 - YraN family protein, at 1,871,864 to 1,872,265 _RS08490
Group Condition RALBFv3_RS08470 RALBFv3_RS08475 RALBFv3_RS08480 RALBFv3_RS08485 RALBFv3_RS08490
in planta tomato xylem local (total stem) -0.4 -0.4 N.D. -0.5 -1.3
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -0.6 N.D. -0.2 -0.3
m63_quarter_strength M63_quarter_strength -0.0 -0.1 N.D. -0.0 -1.4
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.2 -0.6 N.D. -0.4 -0.6
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.1 N.D. -0.3 -0.7
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.3 -0.4 N.D. -0.2 -0.7
smsa no antibiotic control SMSA no antibiotic control -0.2 -0.1 N.D. -0.3 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 +0.1 N.D. -0.3 -0.3
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.2 -0.3 N.D. -0.3 -0.4
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.1 +0.1 N.D. -0.1 -0.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.0 +0.2 N.D. -0.4 -0.5
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.1 +0.1 N.D. +0.2 -0.9
cpg CPG +0.1 -0.2 N.D. +0.1 -0.6
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.0 +0.2 N.D. -0.5 -0.3
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.1 -0.1 N.D. -0.2 -0.5
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.3 +0.1 N.D. -0.2 -0.2
in planta tomato xylem local (total stem) -0.0 +0.4 N.D. -0.2 -0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.0 +0.1 N.D. +0.1 -0.6
in planta tomato xylem local (total stem) +0.2 -0.1 N.D. -0.2 -0.4
stress SMSA with Ralstonia_antibiotic_mix -0.4 +0.1 N.D. +0.2 -0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.1 +0.1 N.D. +0.1 -0.7
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.3 -0.0 N.D. -0.2 -0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.3 -0.1 N.D. -0.2 -0.3
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.1 +0.3 N.D. -0.5 -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.2 +0.2 N.D. -0.1 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 +0.2 N.D. -0.1 -0.4
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 +0.3 N.D. -0.2 -0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.3 +0.3 N.D. +0.3 -0.3
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.4 +0.5 N.D. -0.4 +0.6
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.3 +0.7 N.D. -0.1 +0.9
remove
RALBFv3_RS08470
plot		 remove
RALBFv3_RS08475
plot		 remove
RALBFv3_RS08480		 remove
RALBFv3_RS08485
plot		 remove
RALBFv3_RS08490
plot