Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS07745 and RALBFv3_RS07750 are separated by 96 nucleotidesRALBFv3_RS07750 and RALBFv3_RS07755 are separated by 16 nucleotidesRALBFv3_RS07755 and RALBFv3_RS07760 are separated by 378 nucleotidesRALBFv3_RS07760 and RALBFv3_RS07765 are separated by 181 nucleotides RALBFv3_RS07745: RALBFv3_RS07745 - type II secretion system protein GspE, at 1,698,777 to 1,700,333 _RS07745 RALBFv3_RS07750: RALBFv3_RS07750 - DUF4153 domain-containing protein, at 1,700,430 to 1,702,169 _RS07750 RALBFv3_RS07755: RALBFv3_RS07755 - type II secretion system protein GspF, at 1,702,186 to 1,703,397 _RS07755 RALBFv3_RS07760: RALBFv3_RS07760 - hypothetical protein, at 1,703,776 to 1,705,059 _RS07760 RALBFv3_RS07765: RALBFv3_RS07765 - hypothetical protein, at 1,705,241 to 1,706,527 _RS07765
Group Condition RALBFv3_RS07745 RALBFv3_RS07750 RALBFv3_RS07755 RALBFv3_RS07760 RALBFv3_RS07765
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -6.7 -0.6 -6.5 +0.1 +0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -6.7 -0.8 -6.0 +0.0 -0.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -6.3 -0.7 -6.4 +0.0 -0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -6.5 -0.4 -6.2 +0.0 +0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -6.2 -0.6 -5.3 -0.0 -0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -5.5 -0.5 -5.5 +0.1 -0.0
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -2.5 -0.1 -2.5 -0.0 -0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -2.1 -0.3 -2.1 -0.1 +0.1
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -2.0 -0.0 -1.4 +0.1 +0.2
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -1.9 -0.1 -1.1 +0.0 -0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -1.0 -0.2 -1.3 +0.0 +0.1
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 -0.6 -1.3 +0.1 +0.1
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.8 -0.1 -1.1 -0.1 -0.1
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 -0.3 -1.1 +0.0 -0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.9 -0.4 -0.8 -0.0 -0.0
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.1 -0.4 -0.4 -0.0 +0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.7 -0.1 -0.9 -0.1 -0.1
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -1.2 -0.1 -0.4 -0.1 -0.1
m63_quarter_strength M63_quarter_strength -0.9 -0.4 -0.4 -0.1 -0.0
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.9 -0.2 -0.4 -0.2 -0.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -1.0 -0.1 -0.6 -0.1 +0.1
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.9 +0.1 -0.6 -0.4 +0.1
m63_quarter_strength M63_quarter_strength -0.6 -0.3 -0.5 -0.1 -0.1
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.8 -0.5 -0.4 +0.2 -0.0
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 -0.6 -0.3 -0.1 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.9 +0.1 -0.6 +0.0 -0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.6 -0.1 -0.5 -0.2 +0.0
in planta tomato xylem local (total stem) -0.9 +0.3 -0.6 -0.0 -0.0
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -1.2 +0.2 -0.3 -0.1 +0.0
in planta tomato xylem local (total stem) -0.5 +0.2 -0.8 -0.2 +0.1
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