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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS07735 and RALBFv3_RS07740 are separated by 33 nucleotides
RALBFv3_RS07740 and RALBFv3_RS07745 are separated by 34 nucleotides
RALBFv3_RS07745 and RALBFv3_RS07750 are separated by 96 nucleotides
RALBFv3_RS07750 and RALBFv3_RS07755 are separated by 16 nucleotides
RALBFv3_RS07735: RALBFv3_RS07735 - type II secretion system protein N, at 1,695,428 to 1,696,279
_RS07735
RALBFv3_RS07740: RALBFv3_RS07740 - type II secretion system protein GspD, at 1,696,313 to 1,698,742
_RS07740
RALBFv3_RS07745: RALBFv3_RS07745 - type II secretion system protein GspE, at 1,698,777 to 1,700,333
_RS07745
RALBFv3_RS07750: RALBFv3_RS07750 - DUF4153 domain-containing protein, at 1,700,430 to 1,702,169
_RS07750
RALBFv3_RS07755: RALBFv3_RS07755 - type II secretion system protein GspF, at 1,702,186 to 1,703,397
_RS07755
Group
Condition
RALBFv3
_RS07735
RALBFv3
_RS07740
RALBFv3
_RS07745
RALBFv3
_RS07750
RALBFv3
_RS07755
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.7
-5.5
-6.7
-0.8
-6.0
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.4
-5.3
-6.3
-0.7
-6.4
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.6
-4.7
-6.7
-0.6
-6.5
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.6
-5.1
-6.5
-0.4
-6.2
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.7
-4.9
-6.2
-0.6
-5.3
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.2
-4.8
-5.5
-0.5
-5.5
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
-0.1
-1.5
-2.1
-0.3
-2.1
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+1.0
-1.5
-2.5
-0.1
-2.5
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+0.2
-1.4
-2.0
-0.0
-1.4
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+0.8
-1.7
-1.9
-0.1
-1.1
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.3
-1.0
-0.8
-0.6
-1.3
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
-0.1
-0.7
-1.0
-0.2
-1.3
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
-0.3
-0.9
-0.9
-0.4
-0.8
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.1
-0.9
-0.8
-0.3
-1.1
m63_quarter_strength
M63_quarter_strength
-0.5
-0.5
-0.9
-0.4
-0.4
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
-0.6
-0.3
-0.8
-0.5
-0.4
in planta
Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.5
-0.4
-0.6
-0.6
-0.3
m63_quarter_strength
M63_quarter_strength
-0.3
-0.7
-0.6
-0.3
-0.5
in planta
tomato xylem local (total stem)
-0.6
-0.6
-0.5
+0.2
-0.8
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.2
-0.6
-1.1
-0.4
-0.4
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days
-0.2
-0.4
-1.0
-0.1
-0.6
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.5
-0.0
-1.2
-0.1
-0.4
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.4
-0.5
-0.9
+0.1
-0.6
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+1.0
-0.2
-0.8
-0.1
-1.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.6
-0.0
-0.9
+0.1
-0.6
in planta
tomato xylem local (total stem)
+1.0
-0.2
-0.9
+0.3
-0.6
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.9
-0.2
-0.6
+0.0
-0.6
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+1.1
-0.3
-0.9
+0.0
-0.2
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+1.4
-0.1
-1.2
+0.2
-0.3
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.0
+0.1
+0.0
+0.3
+0.8
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RALBFv3_RS07745
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RALBFv3_RS07755
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