Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS07730 and RALBFv3_RS07735 are separated by 3 nucleotidesRALBFv3_RS07735 and RALBFv3_RS07740 are separated by 33 nucleotidesRALBFv3_RS07740 and RALBFv3_RS07745 are separated by 34 nucleotidesRALBFv3_RS07745 and RALBFv3_RS07750 are separated by 96 nucleotides RALBFv3_RS07730: RALBFv3_RS07730 - general secretion pathway protein GspM, at 1,694,846 to 1,695,424 _RS07730 RALBFv3_RS07735: RALBFv3_RS07735 - type II secretion system protein N, at 1,695,428 to 1,696,279 _RS07735 RALBFv3_RS07740: RALBFv3_RS07740 - type II secretion system protein GspD, at 1,696,313 to 1,698,742 _RS07740 RALBFv3_RS07745: RALBFv3_RS07745 - type II secretion system protein GspE, at 1,698,777 to 1,700,333 _RS07745 RALBFv3_RS07750: RALBFv3_RS07750 - DUF4153 domain-containing protein, at 1,700,430 to 1,702,169 _RS07750
Group Condition RALBFv3_RS07730 RALBFv3_RS07735 RALBFv3_RS07740 RALBFv3_RS07745 RALBFv3_RS07750
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -4.6 +0.7 -5.5 -6.7 -0.8
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -4.4 +0.4 -5.3 -6.3 -0.7
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -4.5 +0.6 -5.1 -6.5 -0.4
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -4.5 +0.6 -4.7 -6.7 -0.6
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -3.9 +0.7 -4.9 -6.2 -0.6
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -3.9 +0.2 -4.8 -5.5 -0.5
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -4.1 +0.2 -1.4 -2.0 -0.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -2.1 -0.1 -1.5 -2.1 -0.3
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -2.1 +0.8 -1.7 -1.9 -0.1
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -1.5 +1.0 -1.5 -2.5 -0.1
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.0 -0.3 -1.0 -0.8 -0.6
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -1.9 -0.6 -0.3 -0.8 -0.5
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -2.3 -0.5 -0.0 -1.2 -0.1
m63_quarter_strength M63_quarter_strength -2.2 -0.3 -0.7 -0.6 -0.3
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.0 -0.1 -0.9 -0.8 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -3.7 +0.6 -0.0 -0.9 +0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -1.4 -0.1 -0.7 -1.0 -0.2
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.6 +0.2 -0.6 -1.1 -0.4
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.9 +0.0 -0.5 -0.9 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -3.8 +0.1 +0.1 +0.1 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -3.4 +0.4 +0.0 -0.4 +0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.5 -0.3 -0.9 -0.9 -0.4
m63_quarter_strength M63_quarter_strength -0.6 -0.5 -0.5 -0.9 -0.4
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -2.0 +1.4 -0.1 -1.2 +0.2
cpg CPG -2.5 +0.8 +0.3 +0.1 +0.0
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.0 -0.5 -0.4 -0.6 -0.6
in planta tomato xylem local (total stem) +1.4 -0.6 -0.6 -0.5 +0.2
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +2.2 +1.0 -0.2 -0.8 -0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +2.0 +1.0 +0.1 +0.0 +0.3
in planta tomato xylem local (total stem) +3.7 +1.0 -0.2 -0.9 +0.3
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