Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 100 experiments or choose conditions or try the comparative fitness browser

500 ntRALBFv3_RS07445 and RALBFv3_RS07450 are separated by 19 nucleotidesRALBFv3_RS07450 and RALBFv3_RS07455 are separated by 6 nucleotidesRALBFv3_RS07455 and RALBFv3_RS07460 are separated by 177 nucleotidesRALBFv3_RS07460 and RALBFv3_RS23740 overlap by 13 nucleotides RALBFv3_RS07445: RALBFv3_RS07445 - AraC family transcriptional regulator, at 1,639,338 to 1,640,144 _RS07445 RALBFv3_RS07450: RALBFv3_RS07450 - two-component sensor histidine kinase, at 1,640,164 to 1,641,459 _RS07450 RALBFv3_RS07455: RALBFv3_RS07455 - DNA-binding response regulator, at 1,641,466 to 1,642,197 _RS07455 RALBFv3_RS07460: RALBFv3_RS07460 - MipA/OmpV family protein, at 1,642,375 to 1,643,160 _RS07460 RALBFv3_RS23740: RALBFv3_RS23740 - hypothetical protein, at 1,643,148 to 1,643,339 _RS23740
Group Condition RALBFv3_RS07445 RALBFv3_RS07450 RALBFv3_RS07455 RALBFv3_RS07460 RALBFv3_RS23740
in planta tomato xylem local (total stem) +0.2 -0.7 -0.0 -0.3 N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.6 +0.2 -0.7 +0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.1 -0.2 +0.1 -0.4 N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.7 -0.8 +0.4 -0.7 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.3 +0.2 -0.3 +0.2 N.D.
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.8 +0.9 -0.2 N.D.
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.5 -0.5 -0.1 -0.1 N.D.
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.0 -0.4 -0.2 -0.5 N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 -0.6 +0.5 -0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.2 -0.2 +0.3 -0.2 N.D.
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 -0.8 +0.7 -0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.7 -0.2 -0.2 +0.1 N.D.
in planta tomato xylem local (total stem) +1.1 -0.2 -0.0 -0.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 -0.4 +0.4 +0.3 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 -0.2 -0.0 +0.7 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.4 +0.1 +0.4 -0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 -0.1 +0.2 +0.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.7 +0.1 +0.1 -0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 +0.2 +0.2 +0.4 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.1 +0.5 +0.0 +0.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.6 +0.2 +0.6 -0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.4 +0.2 +0.0 +0.3 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.8 -0.2 +0.3 +0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.3 +0.2 +0.3 +0.3 N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 -0.3 +0.4 +0.7 N.D.
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.4 -0.1 +0.7 +0.2 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.7 +0.2 +0.7 -0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 +0.3 +0.8 -0.0 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.7 +0.1 +0.6 +0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 +0.3 +0.8 +0.3 N.D.
remove
RALBFv3_RS07445
plot		 remove
RALBFv3_RS07450
plot		 remove
RALBFv3_RS07455		 remove
RALBFv3_RS07460
plot		 remove
RALBFv3_RS23740
plot