Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS06935 and RALBFv3_RS06940 overlap by 4 nucleotidesRALBFv3_RS06940 and RALBFv3_RS06945 are separated by 173 nucleotidesRALBFv3_RS06945 and RALBFv3_RS06950 overlap by 4 nucleotidesRALBFv3_RS06950 and RALBFv3_RS06955 overlap by 4 nucleotides RALBFv3_RS06935: RALBFv3_RS06935 - 3-dehydroquinate synthase, at 1,539,335 to 1,540,441 _RS06935 RALBFv3_RS06940: RALBFv3_RS06940 - shikimate kinase, at 1,540,438 to 1,540,977 _RS06940 RALBFv3_RS06945: RALBFv3_RS06945 - type IV pilus secretin PilQ, at 1,541,151 to 1,543,292 _RS06945 RALBFv3_RS06950: RALBFv3_RS06950 - pilus assembly protein PilP, at 1,543,289 to 1,543,834 _RS06950 RALBFv3_RS06955: RALBFv3_RS06955 - pilus assembly protein PilO, at 1,543,831 to 1,544,490 _RS06955
Group Condition RALBFv3_RS06935 RALBFv3_RS06940 RALBFv3_RS06945 RALBFv3_RS06950 RALBFv3_RS06955
m63_quarter_strength M63_quarter_strength N.D. -3.9 -0.2 -0.9 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -4.2 -0.3 +0.1 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -4.4 +0.0 +0.2 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -4.2 -0.1 +0.3 -0.4
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -2.0 -0.6 -0.7 -0.8
m63_quarter_strength M63_quarter_strength N.D. -3.0 -0.3 -0.4 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -3.7 -0.1 -0.1 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -3.7 -0.0 -0.1 -0.0
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -1.2 -0.6 -0.8 -1.0
cpg CPG N.D. -4.5 +0.3 +0.5 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -3.1 +0.1 -0.2 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -4.7 +0.7 +0.5 +0.7
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -2.4 +0.2 -0.5 +0.7
in planta tomato xylem local (total stem) N.D. +0.6 -0.7 -0.7 -1.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -4.5 +1.0 +0.9 +0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -4.0 +0.9 +0.5 +0.8
cpg CPG N.D. -3.2 +0.5 +0.4 +0.5
in planta tomato xylem local (total stem) N.D. +1.2 -0.8 -0.3 -1.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -4.1 +0.9 +1.1 +0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -4.7 +1.0 +1.0 +1.3
cpg CPG N.D. -2.3 +0.4 +0.3 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -4.3 +1.0 +0.9 +1.3
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. +1.5 -0.8 -0.3 -0.6
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. +1.6 -0.8 -0.1 -0.7
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. +1.8 -0.3 -0.2 -0.9
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +2.0 -0.3 -0.6 -0.4
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +2.3 -0.2 -0.0 -0.7
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. +2.4 -0.3 +0.4 -1.0
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +2.6 -0.5 -0.2 -0.1
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +2.0 +0.3 +0.3 +0.8
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