Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS06930 and RALBFv3_RS06935 are separated by 18 nucleotidesRALBFv3_RS06935 and RALBFv3_RS06940 overlap by 4 nucleotidesRALBFv3_RS06940 and RALBFv3_RS06945 are separated by 173 nucleotidesRALBFv3_RS06945 and RALBFv3_RS06950 overlap by 4 nucleotides RALBFv3_RS06930: RALBFv3_RS06930 - deoxyguanosinetriphosphate triphosphohydrolase, at 1,538,153 to 1,539,316 _RS06930 RALBFv3_RS06935: RALBFv3_RS06935 - 3-dehydroquinate synthase, at 1,539,335 to 1,540,441 _RS06935 RALBFv3_RS06940: RALBFv3_RS06940 - shikimate kinase, at 1,540,438 to 1,540,977 _RS06940 RALBFv3_RS06945: RALBFv3_RS06945 - type IV pilus secretin PilQ, at 1,541,151 to 1,543,292 _RS06945 RALBFv3_RS06950: RALBFv3_RS06950 - pilus assembly protein PilP, at 1,543,289 to 1,543,834 _RS06950
Group Condition RALBFv3_RS06930 RALBFv3_RS06935 RALBFv3_RS06940 RALBFv3_RS06945 RALBFv3_RS06950
m63_quarter_strength M63_quarter_strength -0.5 N.D. -3.9 -0.2 -0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 N.D. -3.7 -0.0 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.2 N.D. -4.3 +1.0 +0.9
cpg CPG -0.7 N.D. -4.5 +0.3 +0.5
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.9 N.D. -2.0 -0.6 -0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 N.D. -4.2 -0.1 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 N.D. -4.2 -0.3 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 N.D. -3.7 -0.1 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 N.D. -4.4 +0.0 +0.2
m63_quarter_strength M63_quarter_strength -0.0 N.D. -3.0 -0.3 -0.4
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.0 N.D. -1.2 -0.6 -0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.8 N.D. -4.5 +1.0 +0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 N.D. -3.1 +0.1 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.4 N.D. -4.7 +0.7 +0.5
cpg CPG -0.7 N.D. -3.2 +0.5 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 N.D. -4.0 +0.9 +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 N.D. -4.7 +1.0 +1.0
in planta tomato xylem local (total stem) -1.6 N.D. +0.6 -0.7 -0.7
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.9 N.D. -1.8 +0.1 +0.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.6 N.D. -2.4 +0.2 -0.5
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.6 N.D. -1.8 -0.0 +0.6
cpg CPG -0.2 N.D. -2.3 +0.4 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.8 N.D. -4.1 +0.9 +1.1
in planta tomato xylem local (total stem) -0.7 N.D. +1.2 -0.8 -0.3
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.8 N.D. +1.5 -0.8 -0.3
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.9 N.D. +2.0 -0.3 -0.6
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.8 N.D. +1.8 -0.3 -0.2
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.0 N.D. +2.0 +0.5 -0.1
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -1.0 N.D. +2.4 -0.3 +0.4
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 N.D. +2.6 -0.5 -0.2
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RALBFv3_RS06930
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RALBFv3_RS06935
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RALBFv3_RS06945
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RALBFv3_RS06950
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