Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS06890 and RALBFv3_RS06895 are separated by 28 nucleotidesRALBFv3_RS06895 and RALBFv3_RS06900 overlap by 4 nucleotidesRALBFv3_RS06900 and RALBFv3_RS06905 are separated by 236 nucleotidesRALBFv3_RS06905 and RALBFv3_RS06910 are separated by 188 nucleotides RALBFv3_RS06890: RALBFv3_RS06890 - outer membrane lipid asymmetry maintenance protein MlaD, at 1,526,130 to 1,526,648 _RS06890 RALBFv3_RS06895: RALBFv3_RS06895 - ABC transporter permease, at 1,526,677 to 1,527,444 _RS06895 RALBFv3_RS06900: RALBFv3_RS06900 - ABC transporter ATP-binding protein, at 1,527,441 to 1,528,280 _RS06900 RALBFv3_RS06905: RALBFv3_RS06905 - Plasmid pENH91 DNA, SacI-KpnI region containing chlorocatechol degradative operon, at 1,528,517 to 1,529,551 _RS06905 RALBFv3_RS06910: RALBFv3_RS06910 - glutamate synthase subunit beta, at 1,529,740 to 1,531,203 _RS06910
Group Condition RALBFv3_RS06890 RALBFv3_RS06895 RALBFv3_RS06900 RALBFv3_RS06905 RALBFv3_RS06910
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -6.3 N.D. -2.5 +0.4 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -6.2 N.D. -2.4 +0.4 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -6.2 N.D. -2.4 +0.2 +0.2
stress SMSA with Ralstonia_antibiotic_mix -6.3 N.D. -2.4 +0.4 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -6.3 N.D. -2.5 +0.6 +0.1
stress SMSA with Ralstonia_antibiotic_mix -5.7 N.D. -2.6 +0.1 +0.2
in planta tomato xylem local (total stem) -3.5 N.D. -1.4 -0.4 -2.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -4.6 N.D. -2.5 -0.5 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -5.0 N.D. -2.6 -0.4 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -4.6 N.D. -2.5 -0.1 -0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -5.8 N.D. -1.8 -0.0 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -4.7 N.D. -2.5 -0.2 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -4.6 N.D. -2.5 +0.4 -0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -4.8 N.D. -1.9 -0.2 -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -4.2 N.D. -2.6 -0.3 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -4.5 N.D. -2.4 +0.2 -0.6
stress SMSA with Ralstonia_antibiotic_mix -4.5 N.D. -2.4 -0.3 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -4.4 N.D. -2.6 -0.1 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -4.2 N.D. -2.8 +0.2 -0.1
in planta tomato xylem local (total stem) -3.5 N.D. -1.5 -1.2 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -3.1 N.D. -1.0 -0.6 -1.3
in planta tomato xylem local (total stem) -2.1 N.D. -1.4 -1.4 -1.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -3.4 N.D. -2.5 +0.1 -0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -4.4 N.D. -0.3 +0.0 -1.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.1 N.D. -2.4 -0.6 -1.5
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -1.9 N.D. -0.4 -1.1 -2.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -3.2 N.D. -1.8 -0.2 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.9 N.D. -1.5 -0.8 -1.9
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +1.8 N.D. +1.2 -1.2 -2.0
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +2.3 N.D. +1.6 -0.7 -1.1
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