Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS06600 and RALBFv3_RS06605 are separated by 20 nucleotidesRALBFv3_RS06605 and RALBFv3_RS06610 are separated by 312 nucleotidesRALBFv3_RS06610 and RALBFv3_RS06615 are separated by 346 nucleotidesRALBFv3_RS06615 and RALBFv3_RS06620 overlap by 28 nucleotides RALBFv3_RS06600: RALBFv3_RS06600 - monothiol glutaredoxin, Grx4 family, at 1,467,923 to 1,468,234 _RS06600 RALBFv3_RS06605: RALBFv3_RS06605 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, at 1,468,255 to 1,468,899 _RS06605 RALBFv3_RS06610: RALBFv3_RS06610 - hypothetical protein, at 1,469,212 to 1,469,931 _RS06610 RALBFv3_RS06615: RALBFv3_RS06615 - glucan biosynthesis protein D, at 1,470,278 to 1,471,804 _RS06615 RALBFv3_RS06620: RALBFv3_RS06620 - glucans biosynthesis glucosyltransferase MdoH, at 1,471,777 to 1,474,365 _RS06620
Group Condition RALBFv3_RS06600 RALBFv3_RS06605 RALBFv3_RS06610 RALBFv3_RS06615 RALBFv3_RS06620
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.6 -2.8 -2.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.6 -2.6 -2.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.8 -2.0 -1.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.3 -2.0 -2.0
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.7 -2.3 -1.0
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.4 -1.9 -1.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.0 -2.5 -1.5
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.4 -2.1 -1.5
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.6 -2.4 -1.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. N.D. -2.1 -1.3 -0.4
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.6 -1.5 -1.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.2 -1.5 -1.7
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. N.D. -1.3 -1.5 -0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.1 -1.7 -1.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. N.D. -0.1 -1.8 -1.2
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.4 -1.5 -1.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.2 -1.9 -1.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. N.D. -1.2 -1.3 -0.5
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi N.D. N.D. -1.0 -0.7 -1.0
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.4 -0.9 -1.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. N.D. +0.2 -1.6 -1.2
stress SMSA with Ralstonia_antibiotic_mix N.D. N.D. -0.2 -2.1 -0.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. N.D. +0.2 -1.9 -0.7
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. N.D. +0.2 -2.0 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.6 -1.6 -0.9
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. N.D. +0.6 -1.4 -0.7
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. N.D. -0.7 +1.4 +1.2
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. -0.6 +1.4 +1.3
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. N.D. +0.4 +0.3 +1.9
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. N.D. -0.2 +1.5 +1.4
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