Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS06170 and RALBFv3_RS06175 are separated by 171 nucleotidesRALBFv3_RS06175 and RALBFv3_RS06180 are separated by 247 nucleotidesRALBFv3_RS06180 and RALBFv3_RS06185 are separated by 44 nucleotidesRALBFv3_RS06185 and RALBFv3_RS06190 are separated by 2 nucleotides RALBFv3_RS06170: RALBFv3_RS06170 - tRNA-Pro, at 1,372,073 to 1,372,149 _RS06170 RALBFv3_RS06175: RALBFv3_RS06175 - HlyC/CorC family transporter, at 1,372,321 to 1,373,598 _RS06175 RALBFv3_RS06180: RALBFv3_RS06180 - type IV-A pilus assembly ATPase PilB, at 1,373,846 to 1,375,573 _RS06180 RALBFv3_RS06185: RALBFv3_RS06185 - type II secretion system F family protein, at 1,375,618 to 1,376,883 _RS06185 RALBFv3_RS06190: RALBFv3_RS06190 - prepilin peptidase, at 1,376,886 to 1,377,767 _RS06190
Group Condition RALBFv3_RS06170 RALBFv3_RS06175 RALBFv3_RS06180 RALBFv3_RS06185 RALBFv3_RS06190
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. +0.4 -0.4 -0.1 -5.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. +0.3 -0.4 +0.2 -5.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. +0.4 -0.5 +0.2 -5.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. +0.1 -0.1 -0.0 -5.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. +0.2 -1.1 -0.2 -3.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. +0.4 -0.5 -0.1 -3.2
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.4 +0.7 +0.2 -2.4
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. -0.1 +0.6 -0.1 -2.3
m63_quarter_strength M63_quarter_strength N.D. -0.2 -0.1 +0.3 -1.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.4 +0.8 +0.5 -2.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.6 +0.5 +0.7 -2.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. -0.3 +0.7 +0.2 -2.3
stress SMSA with Ralstonia_antibiotic_mix N.D. +0.0 +0.3 +0.3 -2.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. +0.1 +0.4 +0.2 -1.9
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. -0.5 +0.3 +0.6 -1.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.9 +0.5 +0.5 -1.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.1 -0.1 +0.9 -1.4
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. -0.6 +0.3 +0.7 -0.8
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. -0.4 -0.6 +1.2 -0.6
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. -0.1 +0.9 +0.3 -1.3
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. -0.4 +0.6 -0.7 +0.6
in planta tomato xylem local (total stem) N.D. +0.1 +0.8 +0.9 -1.4
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.4 +1.3 +0.6 -0.6
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.2 +1.7 +0.9 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.8 +1.4 +1.5 +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.5 +1.1 +1.7 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.3 +1.2 +1.6 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.0 +0.8 +1.4 +1.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.1 +1.1 +1.7 +0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.2 +1.1 +1.7 +1.2
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