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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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500 nt
RALBFv3_RS06135 and RALBFv3_RS06140 are separated by 5 nucleotides
RALBFv3_RS06140 and RALBFv3_RS06145 are separated by 46 nucleotides
RALBFv3_RS06145 and RALBFv3_RS06150 are separated by 35 nucleotides
RALBFv3_RS06150 and RALBFv3_RS06155 are separated by 198 nucleotides
RALBFv3_RS06135: RALBFv3_RS06135 - RNA pyrophosphohydrolase, at 1,366,321 to 1,367,046
_RS06135
RALBFv3_RS06140: RALBFv3_RS06140 - hypothetical protein, at 1,367,052 to 1,367,684
_RS06140
RALBFv3_RS06145: RALBFv3_RS06145 - glutamate 5-kinase, at 1,367,731 to 1,368,855
_RS06145
RALBFv3_RS06150: RALBFv3_RS06150 - GTPase ObgE, at 1,368,891 to 1,369,991
_RS06150
RALBFv3_RS06155: RALBFv3_RS06155 - 50S ribosomal protein L27, at 1,370,190 to 1,370,450
_RS06155
Group
Condition
RALBFv3
_RS06135
RALBFv3
_RS06140
RALBFv3
_RS06145
RALBFv3
_RS06150
RALBFv3
_RS06155
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-3.3
-0.1
-2.2
N.D.
N.D.
m63_quarter_strength
M63_quarter_strength
-2.5
-0.1
-2.1
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-2.9
-0.2
-1.6
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-1.8
-0.1
-1.6
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-1.5
-0.2
-1.8
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-1.5
-0.3
-1.3
N.D.
N.D.
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-1.9
-0.3
-0.8
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.7
+0.0
-2.2
N.D.
N.D.
xylem sap
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi
-2.4
-0.1
-0.2
N.D.
N.D.
cpg
CPG
-1.9
-0.4
-0.5
N.D.
N.D.
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.4
-0.4
-1.8
N.D.
N.D.
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.3
-0.1
-2.3
N.D.
N.D.
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-2.5
-0.1
+0.0
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.7
-0.3
-1.6
N.D.
N.D.
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-2.5
+0.0
-0.1
N.D.
N.D.
cpg
CPG
-2.1
-0.4
+0.1
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-1.2
+0.1
-1.3
N.D.
N.D.
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-1.9
+0.2
-0.4
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.4
-0.3
-2.0
N.D.
N.D.
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-2.1
+0.2
+0.4
N.D.
N.D.
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.8
+0.0
-1.7
N.D.
N.D.
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+1.2
-0.3
-1.5
N.D.
N.D.
in planta
Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
+2.2
+0.6
-2.5
N.D.
N.D.
in planta
tomato xylem local (total stem)
+1.8
+0.0
-1.5
N.D.
N.D.
in planta
tomato xylem local (total stem)
+1.9
-0.1
-1.2
N.D.
N.D.
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+1.7
-0.3
-0.7
N.D.
N.D.
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+1.6
+0.2
-0.7
N.D.
N.D.
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+2.3
-0.5
-0.6
N.D.
N.D.
in planta
tomato xylem local (total stem)
+2.0
-0.3
-0.2
N.D.
N.D.
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+2.0
+0.1
-0.4
N.D.
N.D.
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