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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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500 nt
RALBFv3_RS06105 and RALBFv3_RS06110 are separated by 48 nucleotides
RALBFv3_RS06110 and RALBFv3_RS06115 are separated by 73 nucleotides
RALBFv3_RS06115 and RALBFv3_RS06120 are separated by 30 nucleotides
RALBFv3_RS06120 and RALBFv3_RS06125 are separated by 64 nucleotides
RALBFv3_RS06105: RALBFv3_RS06105 - signal recognition particle protein, at 1,359,952 to 1,361,388
_RS06105
RALBFv3_RS06110: RALBFv3_RS06110 - hypoxanthine-guanine phosphoribosyltransferase, at 1,361,437 to 1,361,985
_RS06110
RALBFv3_RS06115: RALBFv3_RS06115 - MarC family protein, at 1,362,059 to 1,362,652
_RS06115
RALBFv3_RS06120: RALBFv3_RS06120 - 2-oxoglutarate-dependent dioxygenase, at 1,362,683 to 1,363,561
_RS06120
RALBFv3_RS06125: RALBFv3_RS06125 - lytic transglycosylase, at 1,363,626 to 1,364,360
_RS06125
Group
Condition
RALBFv3
_RS06105
RALBFv3
_RS06110
RALBFv3
_RS06115
RALBFv3
_RS06120
RALBFv3
_RS06125
in planta
Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
-0.4
-1.1
-1.0
-0.0
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
N.D.
-0.4
-0.4
-1.8
+0.1
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
N.D.
-0.5
-0.4
-1.2
-0.2
in planta
tomato xylem local (total stem)
N.D.
+0.1
-0.5
-0.5
-1.0
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
N.D.
-0.2
-0.5
-1.1
-0.2
in planta
Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
N.D.
+0.2
-1.1
-0.7
-0.2
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
N.D.
-0.0
+1.2
-3.0
+0.1
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
N.D.
+0.5
-0.8
-0.9
-0.4
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
N.D.
-0.1
+0.2
-1.3
-0.3
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
N.D.
-0.2
-0.0
-1.2
-0.0
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
N.D.
-0.1
-0.1
-0.7
-0.6
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
N.D.
-0.2
-0.3
-0.4
-0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
-0.5
-0.1
-0.7
-0.1
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
N.D.
-0.3
+0.1
-1.1
-0.1
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
-0.4
-0.1
-1.1
+0.4
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
-0.4
-0.2
-0.8
+0.1
in planta
tomato xylem local (total stem)
N.D.
-0.5
+0.1
-0.6
-0.1
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
-0.8
+0.0
-0.4
+0.1
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
N.D.
-0.5
-0.3
+0.3
-0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
N.D.
-0.3
-0.4
-0.6
+0.6
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
N.D.
+0.3
+0.3
-0.6
-0.3
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
+0.9
+0.1
-1.3
+0.1
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
N.D.
+0.4
+0.6
-0.4
-0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
N.D.
-0.5
+0.5
-0.1
+0.8
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days
N.D.
-0.2
+1.0
+0.0
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
+0.3
+0.8
-0.3
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
N.D.
-0.2
+0.9
-0.3
+0.9
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
N.D.
+0.0
+1.3
-0.1
+0.1
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
N.D.
+0.2
+1.5
+0.0
-0.2
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
N.D.
+0.2
+1.4
-0.1
+0.1
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