Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS06105 and RALBFv3_RS06110 are separated by 48 nucleotidesRALBFv3_RS06110 and RALBFv3_RS06115 are separated by 73 nucleotidesRALBFv3_RS06115 and RALBFv3_RS06120 are separated by 30 nucleotidesRALBFv3_RS06120 and RALBFv3_RS06125 are separated by 64 nucleotides RALBFv3_RS06105: RALBFv3_RS06105 - signal recognition particle protein, at 1,359,952 to 1,361,388 _RS06105 RALBFv3_RS06110: RALBFv3_RS06110 - hypoxanthine-guanine phosphoribosyltransferase, at 1,361,437 to 1,361,985 _RS06110 RALBFv3_RS06115: RALBFv3_RS06115 - MarC family protein, at 1,362,059 to 1,362,652 _RS06115 RALBFv3_RS06120: RALBFv3_RS06120 - 2-oxoglutarate-dependent dioxygenase, at 1,362,683 to 1,363,561 _RS06120 RALBFv3_RS06125: RALBFv3_RS06125 - lytic transglycosylase, at 1,363,626 to 1,364,360 _RS06125
Group Condition RALBFv3_RS06105 RALBFv3_RS06110 RALBFv3_RS06115 RALBFv3_RS06120 RALBFv3_RS06125
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.4 -1.1 -1.0 -0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -0.4 -0.4 -1.8 +0.1
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. -0.5 -0.4 -1.2 -0.2
in planta tomato xylem local (total stem) N.D. +0.1 -0.5 -0.5 -1.0
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. -0.2 -0.5 -1.1 -0.2
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.2 -1.1 -0.7 -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -0.0 +1.2 -3.0 +0.1
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. +0.5 -0.8 -0.9 -0.4
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -0.1 +0.2 -1.3 -0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -0.2 -0.0 -1.2 -0.0
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. -0.1 -0.1 -0.7 -0.6
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. -0.2 -0.3 -0.4 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.5 -0.1 -0.7 -0.1
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. -0.3 +0.1 -1.1 -0.1
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.4 -0.1 -1.1 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.4 -0.2 -0.8 +0.1
in planta tomato xylem local (total stem) N.D. -0.5 +0.1 -0.6 -0.1
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.8 +0.0 -0.4 +0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. -0.5 -0.3 +0.3 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.3 -0.4 -0.6 +0.6
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. +0.3 +0.3 -0.6 -0.3
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.9 +0.1 -1.3 +0.1
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. +0.4 +0.6 -0.4 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.5 +0.5 -0.1 +0.8
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days N.D. -0.2 +1.0 +0.0 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.3 +0.8 -0.3 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.2 +0.9 -0.3 +0.9
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. +0.0 +1.3 -0.1 +0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. +0.2 +1.5 +0.0 -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. +0.2 +1.4 -0.1 +0.1
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