Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS05860 and RALBFv3_RS05865 are separated by 541 nucleotidesRALBFv3_RS05865 and RALBFv3_RS05870 are separated by 75 nucleotidesRALBFv3_RS05870 and RALBFv3_RS05875 are separated by 349 nucleotidesRALBFv3_RS05875 and RALBFv3_RS05880 are separated by 20 nucleotides RALBFv3_RS05860: RALBFv3_RS05860 - LysR family transcriptional regulator, at 1,304,508 to 1,305,551 _RS05860 RALBFv3_RS05865: RALBFv3_RS05865 - type I glyceraldehyde-3-phosphate dehydrogenase, at 1,306,093 to 1,307,091 _RS05865 RALBFv3_RS05870: RALBFv3_RS05870 - transketolase, at 1,307,167 to 1,309,194 _RS05870 RALBFv3_RS05875: RALBFv3_RS05875 - VOC family protein, at 1,309,544 to 1,309,969 _RS05875 RALBFv3_RS05880: RALBFv3_RS05880 - 16S rRNA (uracil(1498)-N(3))-methyltransferase, at 1,309,990 to 1,310,739 _RS05880
Group Condition RALBFv3_RS05860 RALBFv3_RS05865 RALBFv3_RS05870 RALBFv3_RS05875 RALBFv3_RS05880
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -4.5 N.D. N.D. -0.4 -0.4
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -5.2 N.D. N.D. +0.0 +0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -3.0 N.D. N.D. -0.1 -0.5
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -3.7 N.D. N.D. +0.2 +0.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -3.3 N.D. N.D. +0.2 +0.3
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +2.1 N.D. N.D. -0.3 -0.9
in planta tomato xylem local (total stem) +2.6 N.D. N.D. -0.4 -0.8
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +2.6 N.D. N.D. -0.5 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +3.1 N.D. N.D. -0.4 -1.0
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +2.6 N.D. N.D. +0.2 -0.6
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +3.4 N.D. N.D. -0.6 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +2.8 N.D. N.D. +0.1 -0.4
in planta tomato xylem local (total stem) +3.7 N.D. N.D. -0.1 -1.1
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +3.5 N.D. N.D. -0.4 -0.4
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +3.0 N.D. N.D. +0.1 -0.4
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +3.5 N.D. N.D. -0.2 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +3.1 N.D. N.D. -0.0 -0.3
cpg CPG +3.0 N.D. N.D. -0.2 +0.3
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +3.3 N.D. N.D. +0.3 -0.2
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +2.8 N.D. N.D. +0.2 +0.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +4.1 N.D. N.D. +0.2 -0.3
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +4.2 N.D. N.D. +0.2 -0.3
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +4.7 N.D. N.D. -0.3 -0.1
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +4.7 N.D. N.D. +0.0 -0.3
m63_quarter_strength M63_quarter_strength +4.3 N.D. N.D. +0.1 +0.1
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +3.1 N.D. N.D. +0.5 +0.8
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +5.1 N.D. N.D. +0.0 -0.5
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +5.0 N.D. N.D. +0.0 +0.3
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +5.2 N.D. N.D. -0.1 +0.2
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +6.5 N.D. N.D. -0.1 +0.1
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RALBFv3_RS05860
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RALBFv3_RS05865
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