Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	RALBFv3_RS05670	RALBFv3_RS05675	RALBFv3_RS05680	RALBFv3_RS05685	RALBFv3_RS05690
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	N.D.	-0.3	-3.7	-3.8	-1.0
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	N.D.	-0.7	-3.3	-3.7	-0.7
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	N.D.	-0.3	-2.4	-4.3	-1.0
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	N.D.	-0.5	-3.2	-1.5	-2.2
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	N.D.	-0.4	-2.2	-2.6	-2.2
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	N.D.	-0.7	-2.4	-1.2	-2.3
cpg	CPG	N.D.	-0.3	-2.8	-1.5	-1.8
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	N.D.	-0.7	-1.2	-2.3	-1.9
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	N.D.	-0.3	-2.4	-0.9	-2.5
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	N.D.	-0.1	-2.8	-2.0	-1.1
in planta	Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	N.D.	-0.6	-1.3	-2.2	-1.9
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	N.D.	-0.6	-1.3	-2.6	-1.3
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	N.D.	-0.5	-3.2	-2.7	+0.6
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol	N.D.	-1.5	-1.8	-1.1	-1.2
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	N.D.	-0.7	-2.5	-1.2	-1.2
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	N.D.	+0.0	-1.5	-2.4	-1.3
cpg no stress control	CPG no stress control	N.D.	-0.6	-2.4	-2.0	-0.1
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol	N.D.	-1.1	-1.2	-1.7	-0.9
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin	N.D.	-1.3	-0.8	-1.5	-1.3
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	N.D.	-0.3	-2.5	-2.1	-0.0
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days	N.D.	-0.5	-1.6	-1.0	-1.8
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days	N.D.	-0.9	-0.7	-1.2	-2.1
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin	N.D.	-1.7	-1.7	-1.0	-0.5
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days	N.D.	-0.8	-0.8	-1.5	-1.7
stress	SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol	N.D.	-1.5	-1.1	-0.9	-1.1
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	N.D.	-0.5	-1.1	-0.9	-2.1
in planta	tomato xylem local (total stem)	N.D.	-0.5	-1.7	-1.2	-1.1
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet	N.D.	-0.3	-1.9	-2.2	-0.1
xylem sap	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi	N.D.	-0.1	-1.5	-1.3	-1.4
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	N.D.	-0.5	-1.7	-1.9	-0.3