Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS05665 and RALBFv3_RS05670 are separated by 11 nucleotidesRALBFv3_RS05670 and RALBFv3_RS05675 are separated by 32 nucleotidesRALBFv3_RS05675 and RALBFv3_RS05680 are separated by 76 nucleotidesRALBFv3_RS05680 and RALBFv3_RS05685 overlap by 7 nucleotides RALBFv3_RS05665: RALBFv3_RS05665 - hypothetical protein, at 1,260,986 to 1,261,426 _RS05665 RALBFv3_RS05670: RALBFv3_RS05670 - hypothetical protein, at 1,261,438 to 1,261,641 _RS05670 RALBFv3_RS05675: RALBFv3_RS05675 - DNA helicase RecG, at 1,261,674 to 1,263,866 _RS05675 RALBFv3_RS05680: RALBFv3_RS05680 - tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA, at 1,263,943 to 1,265,031 _RS05680 RALBFv3_RS05685: RALBFv3_RS05685 - tRNA guanosine(34) transglycosylase Tgt, at 1,265,025 to 1,266,176 _RS05685
Group Condition RALBFv3_RS05665 RALBFv3_RS05670 RALBFv3_RS05675 RALBFv3_RS05680 RALBFv3_RS05685
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 N.D. -0.7 -3.3 -3.7
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.3 N.D. -0.3 -3.7 -3.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 N.D. -0.3 -2.4 -4.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 N.D. -0.5 -3.2 -2.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 N.D. -0.4 -2.2 -2.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 N.D. -0.5 -3.2 -1.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 N.D. -0.1 -2.8 -2.0
cpg no stress control CPG no stress control +0.2 N.D. -0.6 -2.4 -2.0
cpg CPG -0.1 N.D. -0.3 -2.8 -1.5
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.2 N.D. -0.3 -2.5 -2.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 N.D. -0.6 -1.3 -2.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 N.D. -0.7 -2.5 -1.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.2 N.D. -0.7 -1.2 -2.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.0 N.D. -0.3 -1.9 -2.2
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 N.D. -0.6 -1.3 -2.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.1 N.D. -0.7 -2.4 -1.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.2 N.D. -1.5 -1.8 -1.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.2 N.D. -1.7 -1.7 -1.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.1 N.D. -1.1 -1.2 -1.7
stress SMSA with Ralstonia_antibiotic_mix +0.1 N.D. -1.1 -0.6 -2.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 N.D. +0.0 -1.5 -2.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 N.D. -0.3 -2.4 -0.9
in planta tomato xylem local (total stem) -0.4 N.D. -0.5 -1.7 -1.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.0 N.D. -0.5 -0.6 -2.7
in planta tomato xylem local (total stem) -0.0 N.D. -1.1 -1.3 -1.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.0 N.D. -1.7 -0.6 -1.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.1 N.D. -1.3 -0.8 -1.5
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.6 N.D. -0.5 -1.7 -1.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.1 N.D. -1.5 -1.1 -0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.1 N.D. -0.6 -1.0 -1.8
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