Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS05515 and RALBFv3_RS05520 are separated by 60 nucleotidesRALBFv3_RS05520 and RALBFv3_RS05525 are separated by 43 nucleotidesRALBFv3_RS05525 and RALBFv3_RS05530 are separated by 16 nucleotidesRALBFv3_RS05530 and RALBFv3_RS05535 are separated by 93 nucleotides RALBFv3_RS05515: RALBFv3_RS05515 - VOC family protein, at 1,222,165 to 1,222,560 _RS05515 RALBFv3_RS05520: RALBFv3_RS05520 - cupin domain-containing protein, at 1,222,621 to 1,223,100 _RS05520 RALBFv3_RS05525: RALBFv3_RS05525 - YafY family transcriptional regulator, at 1,223,144 to 1,223,842 _RS05525 RALBFv3_RS05530: RALBFv3_RS05530 - glutathione peroxidase, at 1,223,859 to 1,224,356 _RS05530 RALBFv3_RS05535: RALBFv3_RS05535 - type 4 fimbrial biogenesis PilY1 signal peptide, at 1,224,450 to 1,227,662 _RS05535
Group Condition RALBFv3_RS05515 RALBFv3_RS05520 RALBFv3_RS05525 RALBFv3_RS05530 RALBFv3_RS05535
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.7 +0.0 -1.1 -0.1 +0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.5 +0.3 -1.2 +0.0 +0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.3 +0.2 -1.1 -0.1 +0.2
stress SMSA with Ralstonia_antibiotic_mix -0.9 +0.3 +0.2 -0.2 +0.1
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.1 -0.3 -0.8 -0.2 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.8 -0.1 -0.6 -0.0 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.6 +0.0 +0.6 -0.3 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.2 -0.3 +0.2 -0.2 -0.0
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.5 +0.1 +0.9 -0.3 -0.0
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +1.0 -0.3 +0.5 -0.0 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +1.3 -0.1 +0.3 -0.1 -0.1
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.0 +0.0 +0.6 -0.2 -0.0
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.1 +0.3 +0.0 -0.2 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.7 -0.1 +1.1 -0.1 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.7 +0.0 +0.8 +0.1 -0.2
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.1 -0.2 +1.3 +0.3 +0.0
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.7 +0.2 +0.5 -0.1 +0.1
in planta tomato xylem local (total stem) +1.4 -0.5 +0.2 +0.3 +0.1
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +1.3 -0.2 +0.6 -0.2 -0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.6 +0.3 +0.8 -0.1 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.2 -0.1 +0.5 +0.1 +0.1
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.7 +0.2 +1.0 -0.1 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.5 +0.2 -0.1 +0.2 +0.1
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.9 -0.1 +0.8 +0.3 -0.0
in planta tomato xylem local (total stem) +0.9 -0.1 +1.7 -0.0 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.9 -0.0 +1.6 +0.1 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.3 -0.2 +1.3 +0.2 -0.1
in planta tomato xylem local (total stem) +1.3 +0.4 +0.8 -0.1 +0.2
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +2.4 -0.0 +0.4 +0.5 -0.1
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +1.9 +0.7 +2.5 +0.6 -0.2
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RALBFv3_RS05515
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