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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS05495 and RALBFv3_RS05500 are separated by 9 nucleotides
RALBFv3_RS05500 and RALBFv3_RS05505 are separated by 52 nucleotides
RALBFv3_RS05505 and RALBFv3_RS05510 overlap by 4 nucleotides
RALBFv3_RS05510 and RALBFv3_RS05515 are separated by 163 nucleotides
RALBFv3_RS05495: RALBFv3_RS05495 - glycolate oxidase subunit GlcE, at 1,218,441 to 1,219,586
_RS05495
RALBFv3_RS05500: RALBFv3_RS05500 - glycolate oxidase iron-sulfur subunit, at 1,219,596 to 1,220,843
_RS05500
RALBFv3_RS05505: RALBFv3_RS05505 - CidA/LrgA family protein, at 1,220,896 to 1,221,273
_RS05505
RALBFv3_RS05510: RALBFv3_RS05510 - LrgB family protein, at 1,221,270 to 1,222,001
_RS05510
RALBFv3_RS05515: RALBFv3_RS05515 - VOC family protein, at 1,222,165 to 1,222,560
_RS05515
Group
Condition
RALBFv3
_RS05495
RALBFv3
_RS05500
RALBFv3
_RS05505
RALBFv3
_RS05510
RALBFv3
_RS05515
stress
SMSA with Ralstonia_antibiotic_mix
+0.2
+0.1
-1.7
+0.3
-0.9
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.0
+0.3
-1.9
-0.3
+0.9
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
+0.2
+0.3
-1.5
+0.2
-0.2
in planta
Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.2
+0.6
-1.3
+0.3
-0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.7
+0.1
-1.4
-0.0
+1.3
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.4
+0.4
-1.4
+0.1
+0.7
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.0
+0.6
-1.0
-0.7
+1.0
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.0
-0.3
+0.5
+0.5
-0.8
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.3
+0.2
-0.7
-0.1
+0.9
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.3
+0.4
-1.2
+0.1
+1.1
in planta
tomato xylem local (total stem)
-1.4
+0.3
+0.0
-0.1
+1.4
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
-1.2
+0.5
+0.6
+0.1
+0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.2
+0.4
-0.6
-0.2
+1.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
+0.3
+0.3
-0.7
+0.2
+0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.5
+0.3
+0.4
-0.2
+0.6
in planta
tomato xylem local (total stem)
-0.2
+0.9
-1.6
+0.1
+1.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
+0.6
-0.1
-0.7
+0.2
+0.7
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.2
+0.4
+0.4
-0.4
+0.7
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.1
+0.5
-0.5
+0.2
+0.6
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.9
-0.1
+0.5
+0.1
-0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.2
+0.7
-0.3
-0.2
+1.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.8
+0.7
-0.2
+0.3
+1.2
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.2
+0.2
-0.2
+0.2
+1.3
in planta
tomato xylem local (total stem)
+0.4
+0.4
+0.1
-0.3
+0.9
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.4
+0.2
+0.4
+0.4
+1.0
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.2
+0.2
+0.0
-0.3
+1.9
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.1
+0.5
+0.2
-0.1
+1.5
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.9
+0.6
+0.6
-0.1
+0.1
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.5
+0.2
+1.0
-0.2
+1.1
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.2
+0.4
-0.2
+0.2
+2.4
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RALBFv3_RS05505
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