Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS05445 and RALBFv3_RS05450 are separated by 5 nucleotidesRALBFv3_RS05450 and RALBFv3_RS05455 are separated by 27 nucleotidesRALBFv3_RS05455 and RALBFv3_RS05460 are separated by 391 nucleotidesRALBFv3_RS05460 and RALBFv3_RS05465 are separated by 67 nucleotides RALBFv3_RS05445: RALBFv3_RS05445 - TIGR02099 family protein, at 1,203,451 to 1,207,725 _RS05445 RALBFv3_RS05450: RALBFv3_RS05450 - carbon-nitrogen hydrolase family protein, at 1,207,731 to 1,208,600 _RS05450 RALBFv3_RS05455: RALBFv3_RS05455 - metalloprotease TldD, at 1,208,628 to 1,210,088 _RS05455 RALBFv3_RS05460: RALBFv3_RS05460 - 3-deoxy-7-phosphoheptulonate synthase, at 1,210,480 to 1,211,559 _RS05460 RALBFv3_RS05465: RALBFv3_RS05465 - type II toxin-antitoxin system HipA family toxin, at 1,211,627 to 1,212,943 _RS05465
Group Condition RALBFv3_RS05445 RALBFv3_RS05450 RALBFv3_RS05455 RALBFv3_RS05460 RALBFv3_RS05465
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 +0.1 -0.7 -2.9 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 -0.0 -0.8 -2.9 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 +0.0 -0.5 -3.0 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 -0.0 -0.6 -2.9 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 -0.1 -0.5 -2.5 +0.0
cpg CPG -0.1 +0.0 -0.1 -3.2 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 +0.0 -0.1 -2.7 -0.0
cpg CPG -0.3 -0.1 -0.2 -2.3 -0.2
cpg CPG -0.1 +0.1 -0.2 -2.6 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 +0.2 -0.2 -2.7 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 +0.0 -0.3 -2.3 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 -0.1 -0.5 -2.0 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -1.9 +0.1 +0.0 -0.6 -0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.4 -0.3 -1.5 -0.6 +0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.6 -0.7 -1.3 -0.6 +0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.5 -0.6 -1.5 -0.2 +0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.8 -0.8 -1.6 -0.0 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.6 -0.1 -0.4 -1.7 +0.2
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.4 -0.1 -0.5 +1.7 -0.1
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.2 +0.1 -0.8 +1.2 +0.3
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -1.1 -0.2 -0.5 +1.5 +0.2
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.1 -0.2 -0.3 +1.4 +0.3
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 -0.0 -1.0 +2.1 -0.4
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.3 -0.6 +1.7 -0.1
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -0.1 -0.4 +1.5 +0.3
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.5 -0.1 -0.2 +1.8 +0.1
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 +0.0 -0.8 +2.4 -0.1
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 -0.1 -0.2 +2.1 +0.1
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -1.2 -0.3 -0.0 +3.3 +0.0
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.2 +0.1 +0.1 +2.4 +0.1
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