Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 100 experiments or choose conditions or try the comparative fitness browser

500 ntRALBFv3_RS05295 and RALBFv3_RS05300 are separated by 11 nucleotidesRALBFv3_RS05300 and RALBFv3_RS05305 overlap by 1 nucleotidesRALBFv3_RS05305 and RALBFv3_RS05310 are separated by 32 nucleotidesRALBFv3_RS05310 and RALBFv3_RS05315 are separated by 56 nucleotides RALBFv3_RS05295: RALBFv3_RS05295 - HAD-IB family hydrolase, at 1,169,835 to 1,170,509 _RS05295 RALBFv3_RS05300: RALBFv3_RS05300 - polynucleotide adenylyltransferase PcnB, at 1,170,521 to 1,172,071 _RS05300 RALBFv3_RS05305: RALBFv3_RS05305 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase, at 1,172,071 to 1,172,580 _RS05305 RALBFv3_RS05310: RALBFv3_RS05310 - deoxynucleoside kinase, at 1,172,613 to 1,173,257 _RS05310 RALBFv3_RS05315: RALBFv3_RS05315 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 1,173,314 to 1,174,135 _RS05315
Group Condition RALBFv3_RS05295 RALBFv3_RS05300 RALBFv3_RS05305 RALBFv3_RS05310 RALBFv3_RS05315
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -5.4 N.D. +0.1 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -3.0 N.D. +0.4 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -2.2 N.D. -0.0 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -1.2 N.D. +1.0 N.D.
cpg CPG N.D. +0.8 N.D. -0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. +1.1 N.D. -0.1 N.D.
cpg CPG N.D. +1.3 N.D. -0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. +1.2 N.D. -0.1 N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.8 N.D. +0.5 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. +0.7 N.D. +0.6 N.D.
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.8 N.D. +0.5 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +1.0 N.D. +0.4 N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +1.1 N.D. +0.3 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. +1.5 N.D. -0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. +1.3 N.D. +0.1 N.D.
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. +1.4 N.D. +0.1 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +1.2 N.D. +0.3 N.D.
in planta tomato xylem local (total stem) N.D. +1.2 N.D. +0.3 N.D.
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +1.4 N.D. +0.2 N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +1.0 N.D. +0.6 N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. +0.7 N.D. +0.9 N.D.
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. +0.8 N.D. +1.1 N.D.
cpg CPG N.D. +1.5 N.D. +0.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +1.9 N.D. -0.1 N.D.
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +1.2 N.D. +0.7 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. +2.2 N.D. +0.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. +2.7 N.D. -0.4 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. +2.2 N.D. +0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +2.1 N.D. +0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. +2.5 N.D. +0.2 N.D.
remove
RALBFv3_RS05295
plot		 remove
RALBFv3_RS05300
plot		 remove
RALBFv3_RS05305		 remove
RALBFv3_RS05310
plot		 remove
RALBFv3_RS05315
plot