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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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500 nt
RALBFv3_RS05265 and RALBFv3_RS05270 are separated by 2 nucleotides
RALBFv3_RS05270 and RALBFv3_RS05275 are separated by 39 nucleotides
RALBFv3_RS05275 and RALBFv3_RS05280 are separated by 83 nucleotides
RALBFv3_RS05280 and RALBFv3_RS05285 are separated by 152 nucleotides
RALBFv3_RS05265: RALBFv3_RS05265 - bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada, at 1,164,791 to 1,165,864
_RS05265
RALBFv3_RS05270: RALBFv3_RS05270 - metal-binding protein, at 1,165,867 to 1,166,139
_RS05270
RALBFv3_RS05275: RALBFv3_RS05275 - hypothetical protein, at 1,166,179 to 1,166,601
_RS05275
RALBFv3_RS05280: RALBFv3_RS05280 - phosphoribosylformylglycinamidine cyclo-ligase, at 1,166,685 to 1,167,755
_RS05280
RALBFv3_RS05285: RALBFv3_RS05285 - AI-2E family transporter, at 1,167,908 to 1,168,978
_RS05285
Group
Condition
RALBFv3
_RS05265
RALBFv3
_RS05270
RALBFv3
_RS05275
RALBFv3
_RS05280
RALBFv3
_RS05285
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.2
-1.2
-1.4
N.D.
+0.2
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.6
-0.7
-1.3
N.D.
+0.5
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.1
-0.8
-0.6
N.D.
+0.0
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.3
+0.1
-1.3
N.D.
+0.1
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.4
-0.3
-0.7
N.D.
+0.2
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.1
-1.3
-0.2
N.D.
+0.5
m63_quarter_strength
M63_quarter_strength
-0.2
-0.5
-0.5
N.D.
+0.4
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.1
-0.3
-0.7
N.D.
+0.3
in planta
tomato xylem local (total stem)
-0.6
-0.7
+0.6
N.D.
+0.2
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.1
+0.4
-0.9
N.D.
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.4
-0.7
+0.7
N.D.
-0.0
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.3
-0.6
+0.4
N.D.
+0.3
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.4
-0.7
+0.8
N.D.
+0.4
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.8
+0.3
-0.9
N.D.
-0.1
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.0
-1.0
+0.8
N.D.
+0.3
in planta
tomato xylem local (total stem)
-0.5
-0.2
+0.9
N.D.
+0.1
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.1
-0.6
+0.7
N.D.
+0.4
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.1
-0.6
+1.1
N.D.
-0.1
in planta
tomato xylem local (total stem)
-0.5
-1.0
+1.5
N.D.
+0.4
cpg no stress control
CPG no stress control
+0.0
-0.5
+0.8
N.D.
+0.2
smsa no antibiotic control
SMSA no antibiotic control
+0.0
-0.5
+1.0
N.D.
+0.1
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.2
-0.8
+1.4
N.D.
+0.2
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.2
-0.1
+0.7
N.D.
+0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.4
+0.5
+0.4
N.D.
+0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.5
+0.2
+0.8
N.D.
+0.4
smsa no antibiotic control
SMSA no antibiotic control
+0.1
+0.3
+1.0
N.D.
+0.1
in planta
Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.1
-0.0
+1.5
N.D.
+0.2
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.3
+0.1
+1.3
N.D.
+0.4
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.2
+0.5
+1.3
N.D.
-0.0
in planta
Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
-0.7
-0.0
+1.9
N.D.
+0.5
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