Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS05255 and RALBFv3_RS05260 are separated by 10 nucleotidesRALBFv3_RS05260 and RALBFv3_RS05265 are separated by 105 nucleotidesRALBFv3_RS05265 and RALBFv3_RS05270 are separated by 2 nucleotidesRALBFv3_RS05270 and RALBFv3_RS05275 are separated by 39 nucleotides RALBFv3_RS05255: RALBFv3_RS05255 - DNA oxidative demethylase AlkB, at 1,163,380 to 1,164,036 _RS05255 RALBFv3_RS05260: RALBFv3_RS05260 - DNA-3-methyladenine glycosylase 2 family protein, at 1,164,047 to 1,164,685 _RS05260 RALBFv3_RS05265: RALBFv3_RS05265 - bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada, at 1,164,791 to 1,165,864 _RS05265 RALBFv3_RS05270: RALBFv3_RS05270 - metal-binding protein, at 1,165,867 to 1,166,139 _RS05270 RALBFv3_RS05275: RALBFv3_RS05275 - hypothetical protein, at 1,166,179 to 1,166,601 _RS05275
Group Condition RALBFv3_RS05255 RALBFv3_RS05260 RALBFv3_RS05265 RALBFv3_RS05270 RALBFv3_RS05275
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.2 +0.1 -0.2 -1.2 -1.4
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -1.2 -0.7 -0.3 -0.4 +0.2
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.1 +0.7 -0.6 -0.7 -1.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.8 +0.9 -0.3 +0.1 -1.3
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 -0.1 +0.1 -0.8 -0.6
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -1.0 +0.4 +0.0 -1.0 +0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 +0.7 -0.5 -0.1 -0.7
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.2 -0.0 -0.4 -0.7 +0.8
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.7 +0.6 -0.7 -0.1 +0.4
in planta tomato xylem local (total stem) -0.3 +0.6 -0.6 -0.7 +0.6
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -1.0 +0.4 -0.2 +0.5 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.8 +0.1 -0.2 -0.1 +0.9
m63_quarter_strength M63_quarter_strength +1.1 +0.2 -0.2 -0.5 -0.5
in planta tomato xylem local (total stem) -0.3 +0.4 -0.5 -1.0 +1.5
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.6 -0.6 +0.8 +0.3 -0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 +0.5 -0.4 -0.7 +0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.4 +0.6 -0.5 -0.2 +0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.2 +0.6 -0.3 -0.3 +0.7
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.3 +0.5 -0.2 -0.1 +0.7
in planta tomato xylem local (total stem) +0.2 +0.5 -0.5 -0.2 +0.9
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.3 +0.1 -0.6 +1.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.7 -0.2 -0.8 +1.4
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 +0.8 -0.3 -0.3 +0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 +0.6 -0.5 +0.2 +0.8
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.3 +0.2 -0.2 +0.5 +1.3
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 +1.0 -0.1 +0.1 +0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.8 +0.6 -0.4 +0.5 +0.4
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.8 -0.3 +0.1 +1.3
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.7 +0.6 -0.7 -0.0 +1.9
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.9 +0.7 -0.1 -0.0 +1.5
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RALBFv3_RS05255
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RALBFv3_RS05260
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RALBFv3_RS05270
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RALBFv3_RS05275
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