Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS05225 and RALBFv3_RS05230 are separated by 60 nucleotidesRALBFv3_RS05230 and RALBFv3_RS05235 are separated by 19 nucleotidesRALBFv3_RS05235 and RALBFv3_RS05240 overlap by 4 nucleotidesRALBFv3_RS05240 and RALBFv3_RS23695 are separated by 100 nucleotides RALBFv3_RS05225: RALBFv3_RS05225 - MCE family protein, at 1,156,822 to 1,158,507 _RS05225 RALBFv3_RS05230: RALBFv3_RS05230 - DNA mismatch repair endonuclease MutL, at 1,158,568 to 1,160,502 _RS05230 RALBFv3_RS05235: RALBFv3_RS05235 - tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA, at 1,160,522 to 1,161,493 _RS05235 RALBFv3_RS05240: RALBFv3_RS05240 - N-acetyltransferase, at 1,161,490 to 1,162,023 _RS05240 RALBFv3_RS23695: RALBFv3_RS23695 - cysteine methyltransferase, at 1,162,124 to 1,162,638 _RS23695
Group Condition RALBFv3_RS05225 RALBFv3_RS05230 RALBFv3_RS05235 RALBFv3_RS05240 RALBFv3_RS23695
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.3 -0.3 -2.8 -0.0 -0.8
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi -0.0 -0.1 -3.3 -0.1 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 -0.3 -4.2 +0.3 +0.6
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.2 -0.8 -2.6 +0.1 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.1 -0.3 -2.4 +0.2 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.1 -0.2 -2.7 +0.3 +0.4
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.2 -0.3 -1.3 +0.0 -0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 -0.3 -2.5 -0.1 +0.8
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.5 -0.3 -1.7 +0.1 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 -0.2 -3.0 +0.5 +0.6
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.7 -0.0 -1.4 +0.5 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 -0.4 -2.5 +0.4 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 -0.5 -2.3 +0.5 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 -0.4 -3.4 +0.5 +1.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 -0.3 -2.8 -0.1 +1.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 -0.4 -2.4 +0.4 +0.8
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.7 +0.1 -0.5 +1.0 -0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 -0.1 -2.3 +0.4 +0.9
in planta tomato xylem local (total stem) +0.3 -0.3 -2.3 +1.2 +0.5
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.1 -0.1 -1.5 +0.5 +0.9
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.1 -0.0 -1.5 +0.2 +1.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.5 -1.3 +0.5 +1.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.0 +0.0 -0.9 -0.4 +1.6
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -0.2 -0.7 +0.6 +1.2
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 -0.3 -0.5 +0.7 +1.4
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.1 -0.2 +0.2 +1.3 +1.0
in planta tomato xylem local (total stem) +0.1 -0.2 -0.3 +1.9 +0.8
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -0.2 +0.6 +0.1 +2.4
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 -0.2 +0.9 -0.2 +1.9
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 +0.1 +0.5 +0.5 +1.3
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RALBFv3_RS05225
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RALBFv3_RS05230
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RALBFv3_RS05240
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RALBFv3_RS23695
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