Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS05120 and RALBFv3_RS05125 are separated by 39 nucleotidesRALBFv3_RS05125 and RALBFv3_RS05130 are separated by 199 nucleotidesRALBFv3_RS05130 and RALBFv3_RS05135 are separated by 104 nucleotidesRALBFv3_RS05135 and RALBFv3_RS05140 overlap by 4 nucleotides RALBFv3_RS05120: RALBFv3_RS05120 - tRNA epoxyqueuosine(34) reductase QueG, at 1,137,759 to 1,138,919 _RS05120 RALBFv3_RS05125: RALBFv3_RS05125 - hypothetical protein, at 1,138,959 to 1,140,719 _RS05125 RALBFv3_RS05130: RALBFv3_RS05130 - membrane protein, at 1,140,919 to 1,141,569 _RS05130 RALBFv3_RS05135: RALBFv3_RS05135 - methylated-DNA--[protein]-cysteine S-methyltransferase, at 1,141,674 to 1,142,153 _RS05135 RALBFv3_RS05140: RALBFv3_RS05140 - site-specific tyrosine recombinase XerD, at 1,142,150 to 1,143,085 _RS05140
Group Condition RALBFv3_RS05120 RALBFv3_RS05125 RALBFv3_RS05130 RALBFv3_RS05135 RALBFv3_RS05140
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -0.0 +0.1 -0.7 -1.8
in planta tomato xylem local (total stem) -0.3 +0.2 -0.3 -0.3 -2.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 +0.2 +0.1 -1.0 -1.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.2 +0.2 -0.2 -0.8 -0.9
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.4 +0.1 -0.1 -0.5 -1.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.5 -0.0 -0.0 -0.1 -1.2
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 -0.0 +0.4 -0.7 -1.5
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.4 +0.1 +0.1 -0.6 -0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 -0.3 -0.0 -0.3 -0.9
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.0 -0.2 -0.4 -0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.6 -0.3 +0.2 -0.5 -0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.4 -0.1 +0.1 -0.2 -0.8
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.1 -0.1 -0.0 -0.8 -0.6
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.3 -0.3 +0.1 -1.2 -0.2
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.2 -0.1 +0.2 -0.8 -0.9
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -1.4 +0.0 +0.1 +0.1 -0.1
cpg CPG -0.2 +0.2 -0.1 -0.2 -0.9
in planta tomato xylem local (total stem) +0.3 -0.1 -0.1 -0.3 -1.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.3 -0.2 +0.2 -0.1 -0.9
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.0 -0.3 +0.4 +0.5 -1.8
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.2 -0.4 +0.3 -0.6 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.5 -0.1 +0.3 -0.2 -0.6
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 +0.1 +0.2 +0.1 -1.1
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.3 +0.1 -0.3 -1.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.1 +0.6 -0.7 -0.8
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.1 +0.1 +1.1 -1.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 -0.2 +0.5 -0.5 +0.3
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.8 +0.1 -0.4 -0.2 +0.7
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.9 -0.0 +0.7 -0.6 +0.2
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 +0.0 +0.6 +0.6 +1.0
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RALBFv3_RS05120
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RALBFv3_RS05125
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RALBFv3_RS05135
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RALBFv3_RS05140
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