Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS05115 and RALBFv3_RS05120 are separated by 16 nucleotidesRALBFv3_RS05120 and RALBFv3_RS05125 are separated by 39 nucleotidesRALBFv3_RS05125 and RALBFv3_RS05130 are separated by 199 nucleotidesRALBFv3_RS05130 and RALBFv3_RS05135 are separated by 104 nucleotides RALBFv3_RS05115: RALBFv3_RS05115 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE, at 1,137,173 to 1,137,742 _RS05115 RALBFv3_RS05120: RALBFv3_RS05120 - tRNA epoxyqueuosine(34) reductase QueG, at 1,137,759 to 1,138,919 _RS05120 RALBFv3_RS05125: RALBFv3_RS05125 - hypothetical protein, at 1,138,959 to 1,140,719 _RS05125 RALBFv3_RS05130: RALBFv3_RS05130 - membrane protein, at 1,140,919 to 1,141,569 _RS05130 RALBFv3_RS05135: RALBFv3_RS05135 - methylated-DNA--[protein]-cysteine S-methyltransferase, at 1,141,674 to 1,142,153 _RS05135
Group Condition RALBFv3_RS05115 RALBFv3_RS05120 RALBFv3_RS05125 RALBFv3_RS05130 RALBFv3_RS05135
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -1.4 +0.0 +0.1 +0.1
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. +0.3 -0.3 +0.1 -1.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. -0.7 -0.1 +0.0 -0.5
cpg CPG N.D. -0.4 +0.0 -0.2 -0.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. -0.6 -0.3 +0.2 -0.5
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. -0.2 +0.2 -0.2 -0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.3 +0.2 +0.1 -1.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.4 -0.2 +0.0 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.4 -0.0 +0.1 -0.7
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. -0.2 -0.4 +0.0 -0.5
cpg no stress control CPG no stress control N.D. -0.3 -0.2 +0.2 -0.6
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. -0.2 -0.4 +0.3 -0.6
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. -0.4 +0.1 +0.1 -0.6
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.2 -0.5 -0.6 +0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -0.9 +0.0 +0.1 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. -0.5 -0.1 +0.3 -0.2
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. +0.2 -0.1 +0.2 -0.8
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -0.7 -0.1 +0.2 +0.3
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.0 -0.0 +0.4 -0.7
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. -0.4 +0.3 +0.2 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.2 +0.2 +0.4 -0.5
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. +0.4 +0.0 +0.2 -0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.3 -0.2 +0.5 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.1 +0.1 +0.6 -0.7
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. -0.5 +0.2 +0.3 +0.3
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.8 +0.1 -0.4 -0.2
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. -0.0 -0.3 +0.4 +0.5
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.3 +0.0 +0.6 +0.6
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.1 -0.1 +0.1 +1.1
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. +0.9 -0.0 +0.7 -0.6
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