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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS04915 and RALBFv3_RS04920 are separated by 14 nucleotides
RALBFv3_RS04920 and RALBFv3_RS04925 are separated by 22 nucleotides
RALBFv3_RS04925 and RALBFv3_RS04930 are separated by 290 nucleotides
RALBFv3_RS04930 and RALBFv3_RS04935 are separated by 9 nucleotides
RALBFv3_RS04915: RALBFv3_RS04915 - hypothetical protein, at 1,098,407 to 1,098,766
_RS04915
RALBFv3_RS04920: RALBFv3_RS04920 - 4-hydroxy-tetrahydrodipicolinate synthase, at 1,098,781 to 1,099,656
_RS04920
RALBFv3_RS04925: RALBFv3_RS04925 - hypothetical protein, at 1,099,679 to 1,100,227
_RS04925
RALBFv3_RS04930: RALBFv3_RS04930 - flagellar biosynthesis protein FlgM, at 1,100,518 to 1,101,411
_RS04930
RALBFv3_RS04935: RALBFv3_RS04935 - glucose-1-dehydrogenase, at 1,101,421 to 1,102,167
_RS04935
Group
Condition
RALBFv3
_RS04915
RALBFv3
_RS04920
RALBFv3
_RS04925
RALBFv3
_RS04930
RALBFv3
_RS04935
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-1.1
-0.4
-1.0
+0.0
-0.2
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.3
-0.2
-1.2
-0.4
+0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet
-0.8
-0.2
-0.5
-0.1
+0.1
cpg
CPG
-0.5
-0.1
-0.9
+0.0
+0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.4
+0.0
-1.0
+0.0
+0.0
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.1
-0.3
-0.9
-0.3
+0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-0.5
-0.1
-0.5
-0.1
+0.1
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.4
-0.4
-0.3
-0.0
+0.2
in planta
Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
-0.1
+0.3
-1.3
+0.2
-0.1
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.5
+0.2
-0.5
-0.5
+0.3
in planta
tomato xylem local (total stem)
-0.5
-0.4
-0.1
-0.4
+0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.6
-0.0
-1.7
-0.5
+0.8
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.4
+0.1
-1.9
-0.2
+0.7
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
+1.1
-0.1
-1.7
-0.2
+0.2
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-1.0
-0.0
+0.2
+0.3
-0.2
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.3
-0.2
-0.6
-0.1
+0.5
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-0.5
+0.2
-0.5
-0.1
+0.3
in planta
tomato xylem local (total stem)
-0.0
-0.5
+0.5
-0.4
-0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.3
-0.2
-0.5
+0.1
+0.4
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.0
-0.2
-0.7
+0.0
+0.4
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.6
-0.0
-0.6
+0.1
-0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.3
+0.1
-0.7
-0.2
+0.5
cpg no stress control
CPG no stress control
-0.4
-0.1
+0.6
-0.1
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.4
+0.0
-0.4
-0.4
+0.7
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.4
-0.2
+0.9
+0.3
-0.1
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.1
-0.1
-0.2
+0.1
+0.9
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.4
-0.0
+1.0
+0.2
+0.0
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.0
+0.0
+1.0
+0.1
-0.3
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.1
-0.2
+1.3
+0.2
+0.3
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.0
-0.1
+0.4
+0.5
+0.9
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RALBFv3_RS04925
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RALBFv3_RS04935
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