Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS04885 and RALBFv3_RS04890 are separated by 57 nucleotidesRALBFv3_RS04890 and RALBFv3_RS04895 are separated by 64 nucleotidesRALBFv3_RS04895 and RALBFv3_RS04900 are separated by 73 nucleotidesRALBFv3_RS04900 and RALBFv3_RS04905 are separated by 3 nucleotides RALBFv3_RS04885: RALBFv3_RS04885 - hypothetical protein, at 1,091,897 to 1,092,358 _RS04885 RALBFv3_RS04890: RALBFv3_RS04890 - LysR family transcriptional regulator, at 1,092,416 to 1,093,381 _RS04890 RALBFv3_RS04895: RALBFv3_RS04895 - LysR family transcriptional regulator, at 1,093,446 to 1,094,363 _RS04895 RALBFv3_RS04900: RALBFv3_RS04900 - MFS transporter, at 1,094,437 to 1,095,993 _RS04900 RALBFv3_RS04905: RALBFv3_RS04905 - DoxX family protein, at 1,095,997 to 1,096,407 _RS04905
Group Condition RALBFv3_RS04885 RALBFv3_RS04890 RALBFv3_RS04895 RALBFv3_RS04900 RALBFv3_RS04905
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -1.0 -0.6 +0.5 -0.4 -0.6
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -1.1 +0.2 -0.2 -0.2 -0.3
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.1 -0.6 -0.4 +0.4 -0.8
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.2 -0.5 -0.0 -0.4
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.3 -1.1 -0.3 +0.1 +0.2
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -1.1 +0.2 -0.0 -0.1
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.2 -0.7 +0.4 -0.1 -0.3
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 +0.3 -0.6 -0.2 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.2 +0.2 +0.2 -0.9
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.2 -0.3 -0.6 +0.2 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 -0.6 +0.1 -0.0 +0.4
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -0.5 +0.3 +0.1 -0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.1 +0.4 -0.0 +0.2 -0.5
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 +0.3 +0.5 +0.3 -0.6
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.1 -0.5 -0.1 +0.1 +0.5
in planta tomato xylem local (total stem) +0.1 -0.2 +0.1 +0.5 -0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.1 +0.8 -0.2 +0.2 -0.6
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.2 -0.2 -0.4 +0.1 +0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 +0.6 -0.2 +0.2 -0.1
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi +0.1 +0.5 +0.3 +0.2 -0.6
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days +0.1 -0.7 +0.2 +0.2 +0.7
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.1 -0.3 +0.2 +0.1 +0.6
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.1 +0.7 -0.2 +0.2 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.6 +0.4 +0.2 -0.2
in planta tomato xylem local (total stem) +0.3 -0.1 -0.2 +0.2 +0.7
in planta tomato xylem local (total stem) +0.0 +0.5 -0.0 -0.1 +0.6
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.2 +0.4 +0.2 +0.2 +0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.2 -0.3 +0.2 +0.1 +0.9
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 +0.1 -0.2 +0.4 +0.9
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.2 +0.2 +0.4 +0.2 +0.3
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RALBFv3_RS04885
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RALBFv3_RS04890
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RALBFv3_RS04900
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RALBFv3_RS04905
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