Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS04790 and RALBFv3_RS04795 are separated by 156 nucleotidesRALBFv3_RS04795 and RALBFv3_RS04800 overlap by 4 nucleotidesRALBFv3_RS04800 and RALBFv3_RS04805 overlap by 4 nucleotidesRALBFv3_RS04805 and RALBFv3_RS04810 are separated by 72 nucleotides RALBFv3_RS04790: RALBFv3_RS04790 - YdcF family protein, at 1,070,790 to 1,071,362 _RS04790 RALBFv3_RS04795: RALBFv3_RS04795 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC, at 1,071,519 to 1,072,724 _RS04795 RALBFv3_RS04800: RALBFv3_RS04800 - LLM class flavin-dependent oxidoreductase, at 1,072,721 to 1,073,773 _RS04800 RALBFv3_RS04805: RALBFv3_RS04805 - dUTP diphosphatase, at 1,073,770 to 1,074,216 _RS04805 RALBFv3_RS04810: RALBFv3_RS04810 - ATP-dependent Clp protease ATP-binding subunit ClpA, at 1,074,289 to 1,076,577 _RS04810
Group Condition RALBFv3_RS04790 RALBFv3_RS04795 RALBFv3_RS04800 RALBFv3_RS04805 RALBFv3_RS04810
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.6 N.D. -0.2 N.D. N.D.
in planta tomato xylem local (total stem) -0.4 N.D. -0.2 N.D. N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.3 N.D. -0.2 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.3 N.D. -0.1 N.D. N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 N.D. +0.2 N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.4 N.D. -0.1 N.D. N.D.
m63_quarter_strength M63_quarter_strength -0.4 N.D. +0.1 N.D. N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 N.D. +0.2 N.D. N.D.
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.4 N.D. +0.1 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.4 N.D. +0.2 N.D. N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.2 N.D. +0.3 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 N.D. +0.3 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 N.D. +0.3 N.D. N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.3 N.D. +0.5 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 N.D. +0.4 N.D. N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 N.D. +0.5 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 N.D. +0.6 N.D. N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 N.D. +0.3 N.D. N.D.
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.3 N.D. +0.2 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 N.D. +0.4 N.D. N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.0 N.D. +0.5 N.D. N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 N.D. +0.4 N.D. N.D.
in planta tomato xylem local (total stem) +0.2 N.D. +0.3 N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.4 N.D. +0.1 N.D. N.D.
m63_quarter_strength M63_quarter_strength +0.2 N.D. +0.4 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 N.D. +0.4 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 N.D. +0.3 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 N.D. +0.3 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 N.D. +0.3 N.D. N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 N.D. +0.9 N.D. N.D.
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