Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS04720 and RALBFv3_RS04725 are separated by 165 nucleotidesRALBFv3_RS04725 and RALBFv3_RS04730 are separated by 5 nucleotidesRALBFv3_RS04730 and RALBFv3_RS04735 overlap by 4 nucleotidesRALBFv3_RS04735 and RALBFv3_RS04740 are separated by 179 nucleotides RALBFv3_RS04720: RALBFv3_RS04720 - 50S ribosomal protein L33, at 1,053,398 to 1,053,568 _RS04720 RALBFv3_RS04725: RALBFv3_RS04725 - L-aspartate oxidase, at 1,053,734 to 1,055,335 _RS04725 RALBFv3_RS04730: RALBFv3_RS04730 - nicotinate-nucleotide diphosphorylase (carboxylating), at 1,055,341 to 1,056,228 _RS04730 RALBFv3_RS04735: RALBFv3_RS04735 - quinolinate synthase NadA, at 1,056,225 to 1,057,373 _RS04735 RALBFv3_RS04740: RALBFv3_RS04740 - aminotransferase, at 1,057,553 to 1,058,743 _RS04740
Group Condition RALBFv3_RS04720 RALBFv3_RS04725 RALBFv3_RS04730 RALBFv3_RS04735 RALBFv3_RS04740
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -3.3 -0.2 -0.7 -0.1 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -3.6 +0.1 -0.1 -0.1 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -3.0 -0.1 -0.4 -0.0 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -3.2 -0.0 -0.0 -0.0 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -3.0 -0.2 -0.1 +0.2 N.D.
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -3.1 +0.1 +0.3 -0.2 N.D.
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -1.9 -0.2 -0.6 -0.2 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -2.5 -0.2 -0.1 -0.1 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -2.6 -0.0 -0.4 +0.2 N.D.
in planta tomato xylem local (total stem) -2.2 +0.2 -0.4 -0.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.0 +0.0 +0.1 -0.4 N.D.
in planta tomato xylem local (total stem) -2.2 -0.0 +0.1 +0.0 N.D.
smsa no antibiotic control SMSA no antibiotic control -1.8 +0.0 +0.0 -0.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.7 -0.0 +0.3 -0.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.6 +0.2 -0.0 -0.4 N.D.
smsa no antibiotic control SMSA no antibiotic control -1.7 +0.1 -0.0 -0.2 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -2.0 -0.1 +0.1 +0.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.8 +0.2 +0.2 -0.5 N.D.
cpg no stress control CPG no stress control -1.6 +0.1 -0.2 -0.0 N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.6 +0.0 +0.8 -0.8 N.D.
smsa no antibiotic control SMSA no antibiotic control -1.7 +0.1 +0.2 -0.0 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.9 +0.1 +0.3 -0.6 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.9 +0.1 +0.4 -0.7 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.9 +0.3 +0.3 -0.7 N.D.
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -1.4 +0.1 +0.7 +0.3 N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.8 +0.3 -0.7 -0.2 N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.2 +0.1 -0.4 -0.4 N.D.
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +2.0 -0.0 -0.5 -0.2 N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +2.0 +0.4 -0.4 -0.3 N.D.
m63_quarter_strength M63_quarter_strength +0.4 +0.3 +0.8 +0.7 N.D.
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RALBFv3_RS04720
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RALBFv3_RS04725
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RALBFv3_RS04735
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RALBFv3_RS04740
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