Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS04505 and RALBFv3_RS04515 are separated by 589 nucleotidesRALBFv3_RS04515 and RALBFv3_RS04520 are separated by 93 nucleotidesRALBFv3_RS04520 and RALBFv3_RS04525 are separated by 64 nucleotidesRALBFv3_RS04525 and RALBFv3_RS04530 are separated by 14 nucleotides RALBFv3_RS04505: RALBFv3_RS04505 - cell division protein ZapA, at 1,012,103 to 1,012,420 _RS04505 RALBFv3_RS04515: RALBFv3_RS04515 - EVE domain-containing protein, at 1,013,010 to 1,013,480 _RS04515 RALBFv3_RS04520: RALBFv3_RS04520 - DUF541 domain-containing protein, at 1,013,574 to 1,014,290 _RS04520 RALBFv3_RS04525: RALBFv3_RS04525 - prolipoprotein diacylglyceryl transferase, at 1,014,355 to 1,015,266 _RS04525 RALBFv3_RS04530: RALBFv3_RS04530 - LysR family transcriptional regulator, at 1,015,281 to 1,016,216 _RS04530
Group Condition RALBFv3_RS04505 RALBFv3_RS04515 RALBFv3_RS04520 RALBFv3_RS04525 RALBFv3_RS04530
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -3.7 +0.2 +0.4 N.D. -1.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.0 +0.7 -0.5 N.D. -1.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.2 +0.4 +0.0 N.D. -2.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.2 -0.1 +0.1 N.D. -1.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.1 +0.1 -0.7 N.D. -1.2
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -3.1 +0.7 -0.0 N.D. -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.7 +0.1 +0.3 N.D. -1.6
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -2.1 +0.8 -0.5 N.D. -1.0
in planta tomato xylem local (total stem) -3.1 +0.9 +0.3 N.D. -0.7
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.4 -0.3 -0.5 N.D. +0.5
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.9 +0.5 -0.3 N.D. -1.4
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.0 +0.6 -0.5 N.D. -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.2 +0.7 -0.1 N.D. -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.5 +0.1 +0.5 N.D. -0.7
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.9 +0.7 +0.2 N.D. -0.5
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.2 +1.2 +0.4 N.D. -0.3
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.1 +0.9 -0.1 N.D. +0.5
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.6 +1.0 -0.5 N.D. +0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +1.5 -0.1 -0.1 N.D. -2.0
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.8 +1.3 -0.1 N.D. -0.9
in planta tomato xylem local (total stem) +2.0 +0.0 -0.8 N.D. -1.6
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +1.4 +0.1 +0.1 N.D. -1.8
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days +0.9 +0.2 +0.2 N.D. -1.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +1.2 -0.0 +0.5 N.D. -0.8
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +2.0 -0.1 +0.2 N.D. -0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +2.1 -0.3 +0.1 N.D. -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +2.3 +0.1 -0.1 N.D. -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +1.6 -0.4 +0.1 N.D. +0.6
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +1.2 +0.2 +0.1 N.D. +1.4
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.6 +1.0 +0.8 N.D. +0.6
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