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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS04360 and RALBFv3_RS04365 are separated by 15 nucleotides
RALBFv3_RS04365 and RALBFv3_RS04370 are separated by 54 nucleotides
RALBFv3_RS04370 and RALBFv3_RS04375 are separated by 257 nucleotides
RALBFv3_RS04375 and RALBFv3_RS04380 are separated by 20 nucleotides
RALBFv3_RS04360: RALBFv3_RS04360 - formate dehydrogenase, at 977,782 to 978,468
_RS04360
RALBFv3_RS04365: RALBFv3_RS04365 - formate dehydrogenase, at 978,484 to 981,480
_RS04365
RALBFv3_RS04370: RALBFv3_RS04370 - formate dehydrogenase, at 981,535 to 981,765
_RS04370
RALBFv3_RS04375: RALBFv3_RS04375 - molecular chaperone, at 982,023 to 982,706
_RS04375
RALBFv3_RS04380: RALBFv3_RS04380 - 4Fe-4S ferredoxin, at 982,727 to 984,886
_RS04380
Group
Condition
RALBFv3
_RS04360
RALBFv3
_RS04365
RALBFv3
_RS04370
RALBFv3
_RS04375
RALBFv3
_RS04380
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-1.0
-0.3
N.D.
+0.0
-0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-1.1
-0.1
N.D.
-0.2
+0.1
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
-0.8
-0.0
N.D.
-0.2
-0.4
in planta
tomato xylem local (total stem)
-0.9
-0.2
N.D.
+0.0
-0.1
in planta
Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
-0.4
-0.2
N.D.
+0.1
-0.5
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.2
-0.3
N.D.
-0.2
-0.3
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.8
-0.2
N.D.
-0.3
+0.3
in planta
tomato xylem local (total stem)
+0.0
-0.5
N.D.
-0.4
-0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.4
-0.3
N.D.
-0.3
-0.0
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.5
-0.2
N.D.
-0.2
-0.0
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.2
-0.4
N.D.
+0.1
-0.4
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.4
-0.1
N.D.
-0.2
-0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
-0.3
-0.2
N.D.
-0.1
-0.2
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.5
-0.3
N.D.
-0.3
+0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
-0.5
-0.0
N.D.
-0.2
-0.1
in planta
Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.5
-0.1
N.D.
-0.2
-0.0
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.5
+0.0
N.D.
-0.3
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.7
-0.1
N.D.
-0.2
+0.3
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.1
-0.1
N.D.
-0.3
-0.3
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.5
-0.3
N.D.
-0.3
+0.4
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.1
-0.2
N.D.
-0.7
+0.2
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.6
-0.1
N.D.
-0.2
+0.4
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.9
+0.1
N.D.
-0.1
+0.4
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.4
-0.1
N.D.
-0.2
+0.3
in planta
tomato xylem local (total stem)
-0.5
-0.2
N.D.
-0.0
+0.4
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.2
-0.2
N.D.
-0.4
+0.6
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.2
-0.2
N.D.
+0.3
+0.1
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.4
+0.2
N.D.
+0.1
+0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.6
-0.2
N.D.
-0.4
+0.1
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.5
-0.0
N.D.
+0.0
+0.7
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