Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS03940 and RALBFv3_RS03945 overlap by 14 nucleotidesRALBFv3_RS03945 and RALBFv3_RS03950 are separated by 426 nucleotidesRALBFv3_RS03950 and RALBFv3_RS03955 overlap by 58 nucleotidesRALBFv3_RS03955 and RALBFv3_RS03960 overlap by 98 nucleotides RALBFv3_RS03940: RALBFv3_RS03940 - signal peptidase, at 868,953 to 872,912 _RS03940 RALBFv3_RS03945: RALBFv3_RS03945 - hypothetical protein, at 872,899 to 875,748 _RS03945 RALBFv3_RS03950: RALBFv3_RS03950 - HlyC/CorC family transporter, at 876,175 to 877,488 _RS03950 RALBFv3_RS03955: RALBFv3_RS03955 - carboxymuconolactone decarboxylase, at 877,431 to 877,898 _RS03955 RALBFv3_RS03960: RALBFv3_RS03960 - MerR family transcriptional regulator, at 877,801 to 878,331 _RS03960
Group Condition RALBFv3_RS03940 RALBFv3_RS03945 RALBFv3_RS03950 RALBFv3_RS03955 RALBFv3_RS03960
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.1 -0.1 -0.5 -0.4 -0.8
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.1 +0.0 -1.0 -0.1 -0.5
m63_quarter_strength M63_quarter_strength -0.1 -0.1 -0.4 -0.5 -0.1
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.2 -0.1 -0.5 +0.0 -0.4
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 +0.0 -0.1 -0.7 -0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.2 -0.0 -0.9 +0.1 -0.1
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.1 -0.3 +0.2 -0.8
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.1 +0.1 -1.1 +0.2 -0.1
in planta tomato xylem local (total stem) +0.2 -0.1 -0.4 +0.1 -0.5
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.3 -0.2 -0.6 -0.2 -0.0
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.2 -0.1 -0.2 -0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.0 -0.4 +0.0 -0.5
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.2 -0.3 -0.0 -0.6
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.3 -0.2 -0.2 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 +0.0 -0.2 -0.1 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.2 -0.3 -0.1 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 -0.0 -0.3 -0.1 -0.3
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 +0.1 -0.5 -0.3 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 +0.1 -0.3 -0.0 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 +0.1 -0.2 -0.3 -0.3
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.3 -0.8 +0.4 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.1 -0.2 +0.3 -0.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.3 +0.2 -0.5 -0.0 -0.0
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.4 -0.2 -0.3 -0.3 +0.5
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.1 +0.1 -0.1 +0.6 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 +0.1 -0.2 +0.0 +0.6
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi +0.5 +0.4 -0.2 +0.1 -0.1
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.2 +0.3 -0.1 -0.1 +0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.2 -0.0 -0.1 +0.9
in planta tomato xylem local (total stem) +0.2 +0.1 +0.2 +0.2 +0.5
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