Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS03735 and RALBFv3_RS03740 are separated by 130 nucleotidesRALBFv3_RS03740 and RALBFv3_RS03745 are separated by 44 nucleotidesRALBFv3_RS03745 and RALBFv3_RS03750 are separated by 185 nucleotidesRALBFv3_RS03750 and RALBFv3_RS03755 are separated by 4 nucleotides RALBFv3_RS03735: RALBFv3_RS03735 - ZIP family metal transporter, at 821,953 to 822,759 _RS03735 RALBFv3_RS03740: RALBFv3_RS03740 - dienelactone hydrolase family protein, at 822,890 to 823,771 _RS03740 RALBFv3_RS03745: RALBFv3_RS03745 - NAD(P)/FAD-dependent oxidoreductase, at 823,816 to 825,141 _RS03745 RALBFv3_RS03750: RALBFv3_RS03750 - DNA polymerase I, at 825,327 to 828,161 _RS03750 RALBFv3_RS03755: RALBFv3_RS03755 - TIGR00730 family Rossman fold protein, at 828,166 to 829,155 _RS03755
Group Condition RALBFv3_RS03735 RALBFv3_RS03740 RALBFv3_RS03745 RALBFv3_RS03750 RALBFv3_RS03755
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. +0.3 +0.1 -2.1 -3.6
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -0.1 +0.2 -0.4 -3.5
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. +0.4 +0.3 -0.7 -2.8
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. +0.8 +0.2 -0.7 -3.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. -0.4 -0.1 -0.1 -2.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. +0.3 +0.1 -0.6 -2.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. -0.1 +0.3 -0.5 -1.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. +0.2 +0.1 -0.4 -1.4
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.3 -0.4 +0.1 -1.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. -0.5 +0.0 -1.1 +0.2
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.4 +0.1 -0.2 -0.8
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. -0.3 -0.2 -1.0 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. +0.1 -0.1 -1.2 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. -0.0 +0.2 -1.3 +0.1
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi N.D. -0.4 -0.4 -0.3 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.5 -0.7 +0.6 -0.1
in planta tomato xylem local (total stem) N.D. -0.8 +0.4 +0.1 -0.4
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.7 -0.3 +0.2 +0.4
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. -0.4 -0.6 +1.0 -0.3
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.4 -0.1 -0.5 +0.6
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. -0.0 +0.3 +0.5 -0.9
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. -0.6 -0.3 +0.5 +0.5
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.6 -0.1 +0.8 -0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.6 +0.0 +0.0 +0.9
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.4 -0.1 +0.5 +0.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. -0.4 +0.0 +0.1 +1.0
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. -0.4 +0.1 +0.0 +1.2
in planta tomato xylem local (total stem) N.D. -0.2 -0.3 +0.3 +1.3
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.3 -0.0 +0.3 +1.2
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.1 -0.2 +0.3 +1.8
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RALBFv3_RS03735
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RALBFv3_RS03740
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RALBFv3_RS03750
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RALBFv3_RS03755
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