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Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS03660 and RALBFv3_RS03665 are separated by 116 nucleotides
RALBFv3_RS03665 and RALBFv3_RS03670 are separated by 239 nucleotides
RALBFv3_RS03670 and RALBFv3_RS03675 are separated by 125 nucleotides
RALBFv3_RS03675 and RALBFv3_RS03680 are separated by 313 nucleotides
RALBFv3_RS03660: RALBFv3_RS03660 - TetR/AcrR family transcriptional regulator, at 804,257 to 804,964
_RS03660
RALBFv3_RS03665: RALBFv3_RS03665 - MBL fold metallo-hydrolase, at 805,081 to 806,130
_RS03665
RALBFv3_RS03670: RALBFv3_RS03670 - tRNA-Met, at 806,370 to 806,445
_RS03670
RALBFv3_RS03675: RALBFv3_RS03675 - RNA polymerase sigma factor RpoD, at 806,571 to 809,048
_RS03675
RALBFv3_RS03680: RALBFv3_RS03680 - DNA primase, at 809,362 to 811,173
_RS03680
Group
Condition
RALBFv3
_RS03660
RALBFv3
_RS03665
RALBFv3
_RS03670
RALBFv3
_RS03675
RALBFv3
_RS03680
in planta
tomato xylem local (total stem)
-0.5
-0.1
N.D.
N.D.
N.D.
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.2
-0.6
N.D.
N.D.
N.D.
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.0
-0.4
N.D.
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
+0.2
-0.3
N.D.
N.D.
N.D.
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.2
-0.3
N.D.
N.D.
N.D.
in planta
Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
+0.3
-0.3
N.D.
N.D.
N.D.
in planta
tomato xylem local (total stem)
+0.4
-0.4
N.D.
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-0.2
+0.2
N.D.
N.D.
N.D.
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.3
-0.2
N.D.
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet
+0.4
-0.1
N.D.
N.D.
N.D.
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.5
-0.2
N.D.
N.D.
N.D.
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.4
-0.1
N.D.
N.D.
N.D.
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.4
-0.0
N.D.
N.D.
N.D.
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.6
-0.2
N.D.
N.D.
N.D.
in planta
tomato xylem local (total stem)
+0.5
-0.0
N.D.
N.D.
N.D.
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+0.4
+0.1
N.D.
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.2
+0.3
N.D.
N.D.
N.D.
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
+0.4
+0.1
N.D.
N.D.
N.D.
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days
+0.4
+0.1
N.D.
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.3
+0.2
N.D.
N.D.
N.D.
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.4
+0.1
N.D.
N.D.
N.D.
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.3
+0.3
N.D.
N.D.
N.D.
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.4
+0.3
N.D.
N.D.
N.D.
m63_quarter_strength
M63_quarter_strength
+0.3
+0.4
N.D.
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.5
+0.2
N.D.
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.4
+0.4
N.D.
N.D.
N.D.
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+0.6
+0.2
N.D.
N.D.
N.D.
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.5
+0.4
N.D.
N.D.
N.D.
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.4
+0.6
N.D.
N.D.
N.D.
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.1
+1.4
N.D.
N.D.
N.D.
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