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Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS03605 and RALBFv3_RS03610 are separated by 34 nucleotides
RALBFv3_RS03610 and RALBFv3_RS03615 are separated by 5 nucleotides
RALBFv3_RS03615 and RALBFv3_RS03620 are separated by 114 nucleotides
RALBFv3_RS03620 and RALBFv3_RS03625 are separated by 149 nucleotides
RALBFv3_RS03605: RALBFv3_RS03605 - glycosyltransferase family 2 protein, at 790,431 to 791,201
_RS03605
RALBFv3_RS03610: RALBFv3_RS03610 - glycosyl transferase, at 791,236 to 792,156
_RS03610
RALBFv3_RS03615: RALBFv3_RS03615 - ligase, at 792,162 to 793,469
_RS03615
RALBFv3_RS03620: RALBFv3_RS03620 - DNA polymerase III subunit alpha, at 793,584 to 797,108
_RS03620
RALBFv3_RS03625: RALBFv3_RS03625 - sulfurtransferase, at 797,258 to 798,106
_RS03625
Group
Condition
RALBFv3
_RS03605
RALBFv3
_RS03610
RALBFv3
_RS03615
RALBFv3
_RS03620
RALBFv3
_RS03625
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-4.0
-3.3
-5.0
N.D.
-0.2
xylem sap
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi
-4.7
-3.2
-4.0
N.D.
-0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-4.8
-2.9
-3.5
N.D.
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-4.6
-3.3
-2.9
N.D.
-0.3
stress
SMSA with Ralstonia_antibiotic_mix
-5.5
-2.9
-2.3
N.D.
-0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
-5.0
-3.3
-2.1
N.D.
-0.1
stress
SMSA with Ralstonia_antibiotic_mix
-6.4
-1.9
-1.7
N.D.
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
-5.1
-2.7
-2.1
N.D.
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-4.1
-3.2
-2.6
N.D.
+0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-3.4
-2.8
-3.1
N.D.
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
-4.1
-2.9
-2.0
N.D.
-0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-3.0
-3.3
-2.4
N.D.
-0.5
xylem sap
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi
-4.1
-2.0
-2.1
N.D.
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
-4.8
-2.5
-1.1
N.D.
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-4.3
-2.3
-1.5
N.D.
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-3.4
-2.7
-1.6
N.D.
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-3.8
-2.6
-1.4
N.D.
-0.1
xylem sap
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi
-3.7
-2.1
-1.3
N.D.
-0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
-3.3
-2.0
-1.9
N.D.
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
-2.8
-1.7
-1.4
N.D.
-0.1
stress
SMSA with Ralstonia_antibiotic_mix
-2.6
-1.5
-1.4
N.D.
-0.4
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-2.4
-0.9
-2.2
N.D.
+0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
-2.6
-1.2
-1.0
N.D.
-0.2
in planta
tomato xylem local (total stem)
-1.5
-0.6
-1.5
N.D.
-0.9
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-1.5
-1.1
-1.3
N.D.
-0.4
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-2.8
-0.2
-0.8
N.D.
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
-2.9
-0.5
+0.1
N.D.
+0.1
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-1.0
-0.8
-1.3
N.D.
-0.0
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-2.9
+0.4
-0.3
N.D.
-0.1
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-2.7
-0.1
-0.3
N.D.
+0.3
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