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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS03590 and RALBFv3_RS03595 are separated by 52 nucleotides
RALBFv3_RS03595 and RALBFv3_RS03600 are separated by 48 nucleotides
RALBFv3_RS03600 and RALBFv3_RS03605 are separated by 247 nucleotides
RALBFv3_RS03605 and RALBFv3_RS03610 are separated by 34 nucleotides
RALBFv3_RS03590: RALBFv3_RS03590 - alkylhydroperoxidase, at 786,838 to 787,443
_RS03590
RALBFv3_RS03595: RALBFv3_RS03595 - lipid A export permease/ATP-binding protein MsbA, at 787,496 to 789,274
_RS03595
RALBFv3_RS03600: RALBFv3_RS03600 - glycosyl transferase, at 789,323 to 790,183
_RS03600
RALBFv3_RS03605: RALBFv3_RS03605 - glycosyltransferase family 2 protein, at 790,431 to 791,201
_RS03605
RALBFv3_RS03610: RALBFv3_RS03610 - glycosyl transferase, at 791,236 to 792,156
_RS03610
Group
Condition
RALBFv3
_RS03590
RALBFv3
_RS03595
RALBFv3
_RS03600
RALBFv3
_RS03605
RALBFv3
_RS03610
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
+0.0
N.D.
-3.8
-5.0
-3.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-0.3
N.D.
-4.2
-4.0
-3.3
stress
SMSA with Ralstonia_antibiotic_mix
-0.0
N.D.
-2.9
-5.5
-2.9
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
+0.0
N.D.
-3.5
-4.8
-2.9
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
+0.0
N.D.
-3.6
-4.1
-3.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-0.1
N.D.
-2.8
-4.6
-3.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
-0.3
N.D.
-2.6
-5.1
-2.7
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
-0.1
N.D.
-2.6
-4.8
-2.5
stress
SMSA with Ralstonia_antibiotic_mix
+0.2
N.D.
-1.8
-6.4
-1.9
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
-0.3
N.D.
-2.5
-4.1
-2.9
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-0.1
N.D.
-3.4
-3.0
-3.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-0.2
N.D.
-3.3
-3.4
-2.7
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-0.1
N.D.
-2.7
-3.8
-2.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
+0.1
N.D.
-2.5
-4.3
-2.3
xylem sap
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi
+0.2
N.D.
-1.1
-4.7
-3.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-0.3
N.D.
-2.4
-3.4
-2.8
xylem sap
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi
+0.0
N.D.
-1.5
-3.7
-2.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
+0.1
N.D.
-1.6
-3.3
-2.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
-0.5
N.D.
-1.5
-2.8
-1.7
xylem sap
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi
+0.3
N.D.
-0.6
-4.1
-2.0
stress
SMSA with Ralstonia_antibiotic_mix
+0.2
N.D.
-1.2
-2.6
-1.5
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.6
N.D.
-1.6
-2.7
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
-0.0
N.D.
-0.9
-2.6
-1.2
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+0.2
N.D.
-1.7
-2.8
-0.2
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.8
N.D.
-0.2
-2.4
-0.9
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
+0.0
N.D.
-0.4
-2.9
-0.5
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.1
N.D.
-0.6
-1.5
-1.1
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+0.4
N.D.
-0.3
-2.9
+0.4
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.5
N.D.
+0.9
-0.8
+0.7
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.2
N.D.
+1.2
-1.1
+0.6
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