Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	RALBFv3_RS03460	RALBFv3_RS03465	RALBFv3_RS03470	RALBFv3_RS03475	RALBFv3_RS03480
in planta	tomato xylem local (total stem)	+0.1	-1.6	-4.0	+0.0	-1.6
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet	+0.1	+0.1	-4.1	+0.0	-1.2
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	+0.1	+0.3	-4.2	+0.3	-1.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet	+0.1	+0.4	-3.9	-0.1	-1.3
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	-0.4	-0.2	-4.1	+0.1	-0.0
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	-0.1	+0.4	-3.8	+0.2	-0.9
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet	-0.2	+0.1	-3.5	-0.1	-0.6
stress	SMSA with Ralstonia_antibiotic_mix	-0.1	-0.1	-3.4	-0.1	-0.6
stress	SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet	+0.0	-0.1	-4.0	-0.1	-0.1
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	-0.4	-0.3	-4.6	+0.4	+0.7
smsa no antibiotic control	SMSA no antibiotic control	+0.1	+0.3	-3.6	-0.0	-0.9
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin	-0.0	+0.1	-3.0	+0.0	-1.2
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	-0.0	+0.4	-2.3	+0.2	-2.4
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	+0.1	-0.1	-2.2	-0.0	-2.0
in planta	Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	+0.1	-0.4	-3.2	+0.2	-0.7
stress	SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet	-0.0	+0.2	-3.8	+0.1	-0.4
stress	SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin	-0.0	+0.1	-3.6	-0.0	-0.5
stress	SMSA with Ralstonia_antibiotic_mix_minus_Penicillin	+0.1	-0.1	-3.9	+0.0	-0.1
stress	SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride	+0.1	+0.1	-4.0	-0.0	+0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin	+0.1	+0.0	-4.0	-0.1	+0.5
cpg no stress control	CPG no stress control	+0.0	+0.3	-3.9	-0.0	+0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin	+0.0	+0.0	-3.9	-0.1	+0.6
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	-0.6	-0.1	-3.3	+0.1	+0.6
stress	SMSA with Ralstonia_antibiotic_mix	+0.1	+0.4	-3.4	+0.1	-0.6
cpg no stress control	CPG no stress control	+0.1	+0.1	-3.9	-0.1	+0.7
stress	SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride	+0.0	+0.3	-3.9	-0.1	+0.8
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol	+0.0	+0.2	-3.4	-0.1	+0.8
in planta	Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days	+0.3	+0.6	-3.5	+0.1	+0.7
in planta	Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days	+0.1	-0.3	-2.6	-0.3	+1.3
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	-0.0	-0.4	-2.7	+0.2	+1.7