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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS03105 and RALBFv3_RS03110 are separated by 169 nucleotides
RALBFv3_RS03110 and RALBFv3_RS03115 are separated by 44 nucleotides
RALBFv3_RS03115 and RALBFv3_RS03120 are separated by 23 nucleotides
RALBFv3_RS03120 and RALBFv3_RS03125 are separated by 56 nucleotides
RALBFv3_RS03105: RALBFv3_RS03105 - LysE family translocator, at 679,405 to 680,007
_RS03105
RALBFv3_RS03110: RALBFv3_RS03110 - DUF924 domain-containing protein, at 680,177 to 680,755
_RS03110
RALBFv3_RS03115: RALBFv3_RS03115 - oxygen-binding heme protein, at 680,800 to 681,204
_RS03115
RALBFv3_RS03120: RALBFv3_RS03120 - ABC transporter permease, at 681,228 to 683,759
_RS03120
RALBFv3_RS03125: RALBFv3_RS03125 - hypothetical protein, at 683,816 to 684,916
_RS03125
Group
Condition
RALBFv3
_RS03105
RALBFv3
_RS03110
RALBFv3
_RS03115
RALBFv3
_RS03120
RALBFv3
_RS03125
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.9
-3.3
-0.1
+0.1
-0.1
in planta
tomato xylem local (total stem)
+0.5
-3.6
+0.3
+0.1
-0.1
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.2
-3.1
+0.7
-0.4
+0.5
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.3
-1.5
+0.1
+0.0
-0.6
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.6
-0.6
-0.6
+0.1
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
+0.3
-1.3
-0.2
-0.1
-0.2
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.4
-2.0
+0.3
+0.2
-0.4
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.7
-1.0
+0.1
-0.1
+0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
-0.1
-1.4
+0.3
-0.2
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.6
-1.2
+0.4
+0.1
+0.3
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.3
-1.1
+1.0
-0.7
-0.0
in planta
tomato xylem local (total stem)
+0.5
-0.5
+0.3
-0.4
-0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.5
-1.2
+0.2
+0.2
-0.2
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.6
+1.0
-0.6
+0.1
-0.4
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.3
+0.9
-0.6
-0.2
+0.2
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
-0.2
+0.9
-0.2
+0.3
-0.7
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.5
+0.6
+0.5
+0.2
-0.5
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.2
+1.1
-0.6
-0.4
+0.1
xylem sap
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi
-0.3
+1.1
-0.2
+0.1
-0.2
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.4
-1.1
+2.4
-0.5
+0.2
cpg no stress control
CPG no stress control
+0.2
+1.1
-0.3
-0.1
-0.2
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.4
+1.4
+0.0
+0.1
-0.0
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.5
-1.4
+2.2
+0.1
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+0.3
+1.1
+0.3
-0.1
-0.3
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.1
+1.6
-0.4
-0.1
+0.2
stress
SMSA with Ralstonia_antibiotic_mix
+0.1
+1.3
+0.2
-0.2
-0.0
cpg
CPG
+0.0
+1.8
-0.1
-0.2
+0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
+0.1
+1.8
+0.2
-0.1
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-0.3
+2.2
+0.2
-0.0
-0.0
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.6
+0.4
+0.6
-0.2
+0.9
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RALBFv3_RS03115
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