Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS03050 and RALBFv3_RS03055 are separated by 344 nucleotidesRALBFv3_RS03055 and RALBFv3_RS03060 overlap by 4 nucleotidesRALBFv3_RS03060 and RALBFv3_RS03065 are separated by 10 nucleotidesRALBFv3_RS03065 and RALBFv3_RS03070 are separated by 102 nucleotides RALBFv3_RS03050: RALBFv3_RS03050 - acetolactate synthase 3 large subunit, at 669,452 to 671,209 _RS03050 RALBFv3_RS03055: RALBFv3_RS03055 - RNA polymerase sigma factor, at 671,554 to 672,120 _RS03055 RALBFv3_RS03060: RALBFv3_RS03060 - DUF3619 domain-containing protein, at 672,117 to 672,557 _RS03060 RALBFv3_RS03065: RALBFv3_RS03065 - DUF3106 domain-containing protein, at 672,568 to 673,425 _RS03065 RALBFv3_RS03070: RALBFv3_RS03070 - RDD family protein, at 673,528 to 674,058 _RS03070
Group Condition RALBFv3_RS03050 RALBFv3_RS03055 RALBFv3_RS03060 RALBFv3_RS03065 RALBFv3_RS03070
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -8.2 -1.2 -1.3 +0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -8.3 -0.9 -1.3 -0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -8.7 -1.6 -0.5 +0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -9.0 +0.6 -0.2 +0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -8.8 -0.5 +0.5 +0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -7.4 +1.1 +0.7 -1.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -1.5 -2.9 -1.4 +0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. -1.9 -2.6 -0.6 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.9 -2.2 -1.4 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. -0.7 -2.7 -1.2 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.6 -2.4 -1.5 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.6 -1.9 -1.8 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.2 -2.1 -1.7 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.2 -2.5 -1.8 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.7 -1.8 -1.7 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.2 -1.7 -1.9 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.5 -1.8 -1.6 -0.0
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. -0.9 -2.4 -0.6 -0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. -0.6 -2.1 -1.0 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -1.1 -2.1 -1.6 +1.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. -0.6 -2.4 -0.4 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. -0.4 -1.8 -1.2 -0.2
cpg no stress control CPG no stress control N.D. -0.4 -1.9 -0.6 -0.5
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. -0.5 -2.1 -0.7 +0.1
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. -2.2 -0.4 +0.3 -1.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.2 -1.8 -1.7 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. -0.3 -1.9 -0.9 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.0 -1.7 -1.7 +0.6
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. -1.1 -1.4 +0.8 +0.1
in planta tomato xylem local (total stem) N.D. -0.8 -2.1 +2.4 -1.1
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