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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS02900 and RALBFv3_RS02905 are separated by 42 nucleotides
RALBFv3_RS02905 and RALBFv3_RS02910 are separated by 16 nucleotides
RALBFv3_RS02910 and RALBFv3_RS02915 are separated by 19 nucleotides
RALBFv3_RS02915 and RALBFv3_RS02920 are separated by 13 nucleotides
RALBFv3_RS02900: RALBFv3_RS02900 - NUDIX hydrolase, at 639,775 to 640,392
_RS02900
RALBFv3_RS02905: RALBFv3_RS02905 - DUF2818 domain-containing protein, at 640,435 to 640,746
_RS02905
RALBFv3_RS02910: RALBFv3_RS02910 - NADH-quinone oxidoreductase subunit NuoN, at 640,763 to 642,235
_RS02910
RALBFv3_RS02915: RALBFv3_RS02915 - NADH-quinone oxidoreductase subunit M, at 642,255 to 643,721
_RS02915
RALBFv3_RS02920: RALBFv3_RS02920 - NADH-quinone oxidoreductase subunit L, at 643,735 to 645,795
_RS02920
Group
Condition
RALBFv3
_RS02900
RALBFv3
_RS02905
RALBFv3
_RS02910
RALBFv3
_RS02915
RALBFv3
_RS02920
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.8
-4.5
N.D.
N.D.
N.D.
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.8
-4.4
N.D.
N.D.
N.D.
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-3.9
-1.2
N.D.
N.D.
N.D.
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
-0.6
-3.9
N.D.
N.D.
N.D.
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.1
-3.9
N.D.
N.D.
N.D.
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.2
-3.8
N.D.
N.D.
N.D.
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.7
-2.9
N.D.
N.D.
N.D.
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.3
-3.9
N.D.
N.D.
N.D.
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.3
-3.8
N.D.
N.D.
N.D.
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-2.2
-1.2
N.D.
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-1.2
-2.1
N.D.
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-2.2
-1.0
N.D.
N.D.
N.D.
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-2.2
-0.5
N.D.
N.D.
N.D.
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+0.9
-3.3
N.D.
N.D.
N.D.
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-1.2
-0.5
N.D.
N.D.
N.D.
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-1.3
-0.3
N.D.
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.7
-0.9
N.D.
N.D.
N.D.
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
+0.0
-1.6
N.D.
N.D.
N.D.
smsa no antibiotic control
SMSA no antibiotic control
-1.2
-0.3
N.D.
N.D.
N.D.
cpg
CPG
-0.8
-0.7
N.D.
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.7
-2.0
N.D.
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
+0.6
-1.0
N.D.
N.D.
N.D.
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.8
+0.5
N.D.
N.D.
N.D.
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.7
-1.0
N.D.
N.D.
N.D.
m63_quarter_strength
M63_quarter_strength
+0.7
-0.8
N.D.
N.D.
N.D.
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
-0.6
+0.8
N.D.
N.D.
N.D.
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.8
+0.5
N.D.
N.D.
N.D.
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.7
+0.8
N.D.
N.D.
N.D.
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+1.5
+0.2
N.D.
N.D.
N.D.
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.6
+0.5
N.D.
N.D.
N.D.
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